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Job DescriptionP30958
Confidence100.00%DateThu Jan 5 11:46:49 GMT 2012
Rank3Aligned Residues401
% Identity37%Templatec1gm5A_
PDB info PDB header:helicaseChain: A: PDB Molecule:recg; PDBTitle: structure of recg bound to three-way dna junction
Resolution3.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   548.550........ .560.........570.........580.........590.........600.........610.........620......
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Query Sequence  DAWSRARQKAA. EKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLV
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Template Sequence  YHLEKARERLAYEELFVLQLAFQKIRKEREKHGGIPKKIEGKLAEEFIKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLL
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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   627..630.........640.........650.........660.........670.........680.........690.........700......
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Query Sequence  CGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDI
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Template Sequence  QGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDV
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   395....400.........410.........420.........430.........440.........450.........460.........470....
 
   707..710.........720.........730.........740.........750.........760.........770.........780......
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Query Sequence  LIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAV
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Template Sequence  VIGTHALIQEDVHFKNLGLVIIDEQHRFEA. . . . . LMNKGKMVDTLVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEV
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   475....480.........490.........500.... .....510.........520.........530.........540.........
 
   787..790..... ....800.........810.........820.........830.........840.........850.........860.....
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Query Sequence  KTFVREYDS. MVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVL
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Template Sequence  QTMLVPMDRVNEVYEFVRQEVMRGGQAFIVYPLIKSAVEMYEYLSKE. . VFKLGLMHGRLSQEEKDRVMLEFAEGRYDIL
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SSTTTTS

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   555....560.........570.........580.........590.........600. ........610.........620.........630..
 
   866...870.........880.........890.........900.........910.........920.........930.........940.....
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Query Sequence  VCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFAL
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Template Sequence  VSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDV. . . GEEAMERLRFFTLNTD. . . GFKI
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   644.....650.........660.........670.........680.........690....... ..700.........710... ....
 
   946...950.........960.....
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Query Sequence  ATHDLEIRGAGELLGEEQSG
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Template Sequence  AEYDLKTRGPGE. . . . KQHG
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   718.720......... 730...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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