Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6W9
Confidence17.92%DateThu Jan 5 11:04:07 GMT 2012
Rank58Aligned Residues78
% Identity22%Templatec3js3C_
PDB info PDB header:lyaseChain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGHPEALGSALTHKWITTDFAEALLEFITPVDGDIEHML
Query Conservation 
       
  
      
     




 


   
 

 



  


 



 







 

 


        
Alig confidence 




















.























.


















........





Template Conservation        
   

         .    
 
   

  
  


    . 

  

      




 ........   

 
Template Sequence  MPQNEKDVLVLLEATNEMFKI. YADRPIITMSMSGMGVISRLCGEI. FGSALTFGAAKSVSAPGQI. . . . . . . . SFKELN
Template Known Secondary structure 

SST.T
SS
B
TGGGT
.
B

BSSS
SSTT

........B
Template Predicted Secondary structure 


.









.












........
Template SS confidence 















































































   175....180.........190..... ....200.........210......... 220.........230........ .240....
 
   81.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  TFMRDLHR
Query Conservation    
  

 
Alig confidence 







Template Conservation    
  
  
Template Sequence  SVLNLLHK
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 







   245....250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions