Job Description P0AFC0 Confidence 98.19% Date Thu Jan 5 11:25:51 GMT 2012 Rank 82 Aligned Residues 76 % Identity 24% Template c3kvhA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:protein syndesmos; PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein) Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.										.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.																								.
Query SS confidence																.	.	.	.	.	.	.	.	.																								.
Query Sequence		V	S	I	L	V	V	I	Y	A	Q	D	T	K	R	.	.	.	.	.	.	.	.	.	V	L	M	L	Q	R	R	D	D	P	D	F	W	Q	S	V	T	G	S	V	E	E	G	.	E	T	A	P	Q	A	A	M	R	E	V	K	E	E	V	T	I	D	V	V	A	E	Q	L	T	L	I	D	C	Q	R	T	V
Query Conservation																.	.	.	.	.	.	.	.	.																								.
Alig confidence																.	.	.	.	.	.	.	.	.										.														.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	C	H	A	M	L	Y	A	A	N	P	G	Q	L	F	G	R	I	P	M	R	F	S	V	L	M	Q	M	R	F	D	.	G	L	L	G	F	P	G	G	F	V	D	R	R	F	W	S	L	E	D	G	L	N	R	V	L	G	L	G	L	R	L	T	E	A	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	T													T	T	.	S					S						T	T	T										S			S						G	G	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	E	I	F	S	H	L	R	H	R	Y	A	P	G	V	T	R	N	T	E	S	W	F	C	L	A	L	P
Query Conservation
Alig confidence		.	.							.	.	.	.	.	.	.	.
Template Conservation		.	.							.	.	.	.	.	.	.	.
Template Sequence		.	.	Y	L	S	S	H	L	.	.	.	.	.	.	.	.	T	R	V	V	A	H	L	Y	A	R	Q	L	T
Template Known Secondary structure		.	.							.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.							.	.	.	.	.	.	.	.
Template SS confidence
				96	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions