Job Description P0AFC0 Confidence 99.63% Date Thu Jan 5 11:25:51 GMT 2012 Rank 75 Aligned Residues 117 % Identity 18% Template c2pnyA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2; PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2 Resolution 1.81 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.							.											.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.							.											.	.	.	.	.	.	.	.	.
Query Sequence		S	I	L	V	V	I	Y	A	Q	D	T	K	R	V	L	M	L	Q	R	R	D	D	.	.	.	.	P	D	F	W	Q	S	.	V	T	G	S	V	E	E	G	E	T	.	.	.	.	.	.	.	.	.	A	P	Q	A	A	M	R	E	V	K	E	E	V	T	I	D	V	V	A	E	Q	L	T	L	I	D	C	Q
Query Conservation																								.	.	.	.							.											.	.	.	.	.	.	.	.	.
Alig confidence														.										.	.	.	.							.											.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		A	F	S	V	V	L	F	N	T	K	N	R	.	I	L	I	Q	Q	R	S	D	T	K	V	T	F	P	G	Y	F	T	D	S	C	S	S	H	P	L	Y	N	P	A	E	L	E	E	K	D	A	I	G	V	R	R	A	A	Q	R	R	L	Q	A	E	L	G	I	P	G	E	Q	I	S	P	E	D	I	V	F	M
Template Known Secondary structure										T	T			.								T	T		S	S	S	T	T		B			S						B	S	S							G	G	G																			T	T	T			G	G	G	S
Template Predicted Secondary structure														.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	E	F	E	I	F	S	H	L	R	H	R	Y	A	P	G	V	T	R	N	T	E	S	W	F	C	L	A	L	P	H	E	R	Q	I	V	F	T	E	H	L	A	Y	K	W	L	D	A	P	A	A	A	A	L	T
Query Conservation
Alig confidence			.	.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		T	.	.	.	.	.	I	Y	H	H	K	A	K	S	D	R	I	W	G	E	H	E	I	C	Y	L	L	L	V	R	K	N	V	T	L	N	P	D	P	S	E	T	K	S	I	L	Y	L	S	Q	E	E	L	W	E	L	L
Template Known Secondary structure			.	.	.	.	.								S	S	S	S	B																					T	T	T
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		132						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions