Job Description P0A6V1 Confidence 100.00% Date Thu Jan 5 11:03:59 GMT 2012 Rank 10 Aligned Residues 270 % Identity 41% Template d1yp2a2 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 2.11

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E	F	V	D	L
Query Conservation
Alig confidence																																																																								.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.
Template Sequence		A	S	R	S	V	L	G	I	I	L	R	L	Y	P	L	T	K	K	R	A	K	P	A	V	P	L	G	A	N	Y	R	L	I	D	I	P	V	S	N	C	L	N	S	N	I	S	K	I	Y	V	L	T	Q	F	N	S	A	S	L	N	R	H	L	S	R	A	Y	A	E	G	.	.	.	.	.	.	F	V	E	V
Template Known Secondary structure														T	T	T	T	T	T	S		G	G	G				T	T	T			T	T										T	T									S																		.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F	G	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	A	Q	Q	S	P	E	N	P	D	W	F	Q	G	T	A	D	A	V	R	Q	Y	L	W	L	F	E	E	H	T	V	L	E	Y	L	I	L	A	G	D	H	L	Y	R	M	D	Y	E	K	F	I	Q	A	H	R	E	T	D	A	D	I	T	V	A	A	L	P	M	D	E	K	R	A	T	A	F	G	L	M
Template Known Secondary structure				S		S	S	T	T	S						S								T					T	T	S			S							S																		T	T		S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.															.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																																																																.	.	.
Template Sequence		K	I	D	E	E	G	R	I	I	E	F	A	E	K	P	Q	G	E	Q	L	Q	A	M	K	V	D	T	T	I	L	G	L	D	D	K	R	A	K	E	M	P	F	I	A	S	M	G	I	Y	V	I	S	K	D	V	M	L	N	L	L	R	D	.	.	.	K	F	P	G	A	N	D	F	G	S	E	V	I	P	G
Template Known Secondary structure					T	T	S	B							S									T				G	G	G	G	S																															T	.	.	.	T		T	T				T	T	T	T
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		248	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure								.																																													.
Query SS confidence								.																																													.
Query Sequence		I	T	E	A	G	L	.	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S	V	V	P	E	L	.	D	M	Y	D	R	N	W	P	I	R	T	Y	N	E
Query Conservation								.																																													.
Alig confidence								.							.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	S	L	G	M	R	V	Q	A	Y	L	Y	.	.	.	.	.	.	.	.	.	.	.	D	G	Y	W	E	D	I	G	T	I	E	A	F	Y	N	A	N	L	G	I	T	K	K	P	V	P	D	F	S	F	Y	D	R	S	A	P	I	Y	T	Q	P	R
Template Known Secondary structure					T	T									.	.	.	.	.	.	.	.	.	.	.		S						S	S										G	G	G		S	S	S		S	S		S			S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.												.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions