 |
Job Description | P0A6V1 | Confidence | 98.75% | Date | Thu Jan 5 11:03:59 GMT 2012 |
Rank | 102 | Aligned Residues | 121 |
% Identity | 14% | Template | d1xhda_ |
SCOP info | Single-stranded left-handed beta-helix
| Trimeric LpxA-like enzymes
| gamma-carbonic anhydrase-like
|
Resolution | 1.90 |
|
 |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | D | M | Y | D | R | N | W | P | I | R | T | Y | N | E | S | L | P | P | A | K | F | V | Q | D | R | S | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | H | G | M | T | L | N | S | L | V | S | G | G | C | V | I | S | G | S | V | V | V | Q | S | V | L | F | S | R | V | R | V | N | S | F | C | N | I | D | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|
|   |   |   |   |
|
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
K | K | P | K | I | A | S | S | A | F | I | A | D | Y | V | T | I | T | G | D | V | Y | V | G | E | E | S | S | I | W | F | N | T | V | I | R | G | D | V | S | P | T | I | I | G | D | R | V | N | V | Q | D | Q | C | T | L | H | Q | S | P | Q | Y | P | L | I | L | E | D | D | V | T | V | G | H | Q | V | I | L | H | S |
Template Known Secondary structure |   |
B |
|
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |
|
| T | T |
|
|  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |  | S |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
365 | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |
|
|
|
|  |  | . |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | L | L | P | E | V | W | V | G | R | S | C | R | L | . |
R | R | C | V | I | D | R | A | C | V | I | P | E | G | M | V | I | G | E | N | A | E | E | D | A | R | R | F | Y | R | S | E | E | G | I | V | L |
Query Conservation |   |
|
|
|   |
|   |   |   |
|
|   |   |   |   |
| . |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|
|   |   |
|
Template Sequence |   |
C | H | I | K | K | D | A | L | I | G | X | G | S | I | I | L | D | G | A | E | I | G | E | G | A | F | I | G | A | G | S | L | V | S | Q | G | K | K | I | P | P | N | T | L | A | F | G | R | P | A | K | V | I |
Template Known Secondary structure |   |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|