Job Description P0A6V1 Confidence 99.64% Date Thu Jan 5 11:03:59 GMT 2012 Rank 56 Aligned Residues 207 % Identity 16% Template d1w77a1 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.00

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		L	P	L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	.	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E
Query Conservation																																																				.
Alig confidence															.	.	.	.	.	.	.	.	.	.													.															.																								.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.													.																																							.	.	.	.	.	.
Template Sequence		M	E	K	S	V	S	V	I	L	L	A	G	G	.	.	.	.	.	.	.	.	.	.	S	M	P	K	Q	Y	I	P	L	L	G	Q	.	P	I	A	L	Y	S	F	F	T	F	S	R	M	P	E	V	K	E	I	V	V	V	C	D	P	F	F	R	D	I	F	E	E	Y	E	E	S	I	.	.	.	.	.	.
Template Known Secondary structure			T	T											.	.	.	.	.	.	.	.	.	.				T	T	T	S			T	T		.												T		T	T										G	G	G	T					T	T	T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.													.																																							.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	.	.	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I
Query Conservation																																																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.															.	.																								.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																									.																																								.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	V	D	L	R	F	A	I	P	G	K	E	R	Q	D	S	V	Y	S	G	L	Q	E	I	.	D	V	N	S	E	L	V	C	I	H	D	S	A	R	P	L	V	N	T	E	D	V	E	K	V	L	K	D	G	S	A	V	G	A	A	V	L	G	V	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S	S									S	S											T	S	.		T	T		S							T	T		T	T																	S							.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																									.																																								.	.	.	.	.	.
Template SS confidence
												145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G
Query Conservation
Alig confidence		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	P	A	K	A	T	I	K	E	V	N	S	D	S	L	V	V	T	L	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	Q	T	P	Q	V	I	K	P	E	L	L	K	K	G	F	E	L	V	K	S	E	G	L	E	V	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.				S					B		T	T	S		B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						S							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	V	S	I	V	E	Y	L	K	H	P	V	Y	V	S	Q	G	S	Y	T	N	I	K	V	T	T	P	D	D	L	L	L	A	E	R	I	L
Template Known Secondary structure		.	.			T	T	G	G	G	S	S									T	T						S
Template Predicted Secondary structure		.	.
Template SS confidence
				263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions