Job Description P0A6V1 Confidence 99.88% Date Thu Jan 5 11:03:59 GMT 2012 Rank 35 Aligned Residues 211 % Identity 16% Template d1vpaa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.67

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	.	.	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M
Query Conservation																																																														.	.
Alig confidence					.														.	.	.														.																											.	.										.	.	.	.	.	.	.	.	.
Template Conservation					.														.	.	.														.																																						.	.	.	.	.	.	.	.	.
Template Sequence		M	N	V	.	A	I	L	L	A	A	G	K	G	E	R	M	S	.	.	.	E	N	V	P	K	Q	F	L	E	I	E	G	R	.	M	L	F	E	Y	P	L	S	T	F	L	K	S	E	A	I	D	G	V	V	I	V	T	R	R	E	W	F	E	V	V	E	K	R	V	F	H	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.										G	G	G		.	.	.		S	S		G	G	G				T	T		.		T	T											T	T		S								G	G	G						T	T				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.														.	.	.														.																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	.	.	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E
Query Conservation																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	K	V	L	G	I	V	E	G	G	D	T	R	S	Q	S	V	R	S	A	L	E	F	L	E	K	F	S	P	S	Y	V	L	V	H	D	S	A	R	P	F	L	R	K	K	H	V	S	E	V	L	R	R	A	R	E	T	G	A	A	T	L	A	L	K	N	S	D	A	L	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	T									S	S													G	G	G			S							T	T	S																			S										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	E	N	D	R	I	E	Y	I	P	R	K	G	V	Y	R	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	Q	A	F	S	Y	E	I	L	K	K	A	H	E	N	G	G	E	W	A	D	D	T	E	P	V	Q	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T								T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T					S	S	S						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	K	L	G	V	K	I	A	L	V	E	G	D	P	L	C	F	K	V	T	F	K	E	D	L	E	L	A	R	I	I	A
Template Known Secondary structure		.	.	.	.	.	.	T	T	T										G	G	G					S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions