Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6V1
Confidence99.29%DateThu Jan 5 11:03:59 GMT 2012
Rank68Aligned Residues207
% Identity15%Templated1vm8a_
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases UDP-glucose pyrophosphorylase
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40........ .50.........60..... ....70.........80...
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Query Sequence  KSVALILAGGRGTRLKDLTNKRAKPAVHFG. . . GKFRIIDFALSNCINSG. . . . . . . . . . . . IRRMGVITQYQSHTLVQH
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Template Sequence  KVAVLLLAGGQGTRLG. . . VSYPKGXYDVGLPSHK. TLFQIQAERILKLQQLAEKHHGNKCTIPWYIXTSGRTXESTKEF
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SB
TTTT...
SSBGGG
B


TT

.BSS





TTT
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   102.......110....... ..120.........130... ......140.........150.........160.........170.......
 
   84.....90.........100.........110... ......120...... ...130.........140... ..
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Query Sequence  IQRGWSFFNEEMNEFVDLLPAQQRMKGENW. . . . . . . . . . . . YRGTADAVTQNLD. . . . . IIRRYKAEYVVILAGDH. IY
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Template Sequence  FTKHKFFGLKKENVVFFQQGXLPAXSFDGKIILEEKNKVSXAPDGNGGLYRALAAQNIVEDXEQRGICSIHVYCVDNILV
Template Known Secondary structure  TGGGGS
GGG


TTS
B
TT


TTTTT

TTBTT
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   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   146...150.........160.........170.........180.........190.........200....... ..210.........220..
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Query Sequence  KQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPS. . . KSLASMGIYVFDADY
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Template Sequence  KVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQRRSSDGRLLFNAGNIANHFFTVPF
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TT
TT
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STT



TT
TTTS

B
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   258.260.........270.........280.........290.........300.........310.........320.........330.......
 
   223......
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Query Sequence  LYELLEE
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Template Sequence  LKDVVNV
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   338.340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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