Job Description P0A6V1 Confidence 99.85% Date Thu Jan 5 11:03:59 GMT 2012 Rank 38 Aligned Residues 226 % Identity 17% Template d1vh1a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.60

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E	F	V
Query Conservation
Alig confidence									.	.	.	.	.				.	.	.														.																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.				.	.	.														.																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	V	I	I	P	A	.	.	.	.	.	R	Y	A	.	.	.	S	T	P	G	K	P	L	V	D	I	N	G	K	.	P	X	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									.	.	.	.	.				.	.	.					T	T	T				T	T		.													T	T		S							S		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.				.	.	.														.																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.						10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																														.	.																																.	.	.
Query SS confidence																																														.	.																																.	.	.
Query Sequence		D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	.	.	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	.	.	.
Query Conservation																																														.	.																																.	.	.
Alig confidence		.	.	.	.																				.	.	.	.																		.	.																																.	.	.
Template Conservation		.	.	.	.																				.	.	.	.
Template Sequence		.	.	.	.	A	G	G	E	V	C	X	T	R	G	T	E	R	L	A	E	V	V	E	.	.	.	.	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	X	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	X	A	T	L	A	V	P	I	H	N	A	E	E	A	F
Template Known Secondary structure		.	.	.	.	T	T																		.	.	.	.		T	T			T	T								T	T		T	T																S	S	S	S															T
Template Predicted Secondary structure		.	.	.	.																				.	.	.	.
Template SS confidence
						61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	.	.	.	.	.	.	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																																													.	.
Template Conservation																																																																										.	.
Template Sequence		N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	X	L	.	.	E	Q	L	R	V	L
Template Known Secondary structure			T	T	S							T	T	S	B						S	S		S	S							S	S							S																						S										T		.	.	T	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	G	L	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		W	Y	G	E	K	I	H	V	A	V	A	Q	.	.	.	.	.	.	.	.	.	.	E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E
Template Known Secondary structure			T	T									S	.	.	.	.	.	.	.	.	.	.	S								S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.											.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions