Job Description P0A6V1 Confidence 100.00% Date Thu Jan 5 11:03:59 GMT 2012 Rank 24 Aligned Residues 242 % Identity 19% Template d1tzfa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.10

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.											.																																										.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.											.
Template Sequence		M	A	S	K	A	V	I	L	A	G	G	L	G	V	K	.	.	.	.	.	.	.	.	P	K	P	M	V	E	I	G	G	K	.	P	I	L	W	H	I	M	K	M	Y	S	V	H	G	I	K	D	F	I	I	C	C	G	Y	K	G	Y	V	I	K	E	Y	F	A	N	Y	F	L	H	M	S	D	V	T	F	H
Template Known Secondary structure												S					.	.	.	.	.	.	.	.		G	G	G				T	T		.													T	T										T	T										T						S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.									.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
						93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	E	E	M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																							.	.
Template Conservation																																												.	.
Template Sequence		M	A	E	N	R	M	E	V	H	H	K	R	V	E	P	W	N	V	T	L	V	D	T	G	D	S	S	M	T	G	G	R	L	K	R	V	A	E	Y	V	K	D	.	.	D	E	A	F	L	F	T	Y	G	D	G	V	A	D	L	D	I	K	A	T	I	D	F	H	K	A	H	G	K	K	A	T	L	T	A	T
Template Known Secondary structure		G	G	G	T					T	T															S	S										T	G	G	G	T	T	T	.	.	S	S							T	T																				S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	P	I	E	E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I
Query Conservation
Alig confidence		.	.	.	.													.																		.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation		.	.	.	.													.																		.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	F	P	P	G	R	F	G	A	L	D	I	Q	.	A	G	Q	V	R	S	F	Q	E	K	P	K	G	D	G	A	M	.	.	.	.	.	.	.	.	I	N	G	G	F	F	V	L	N	P	S	V	I	D	L	I	.	.	.	.	.	.	.	D	N	D	A	T	T	W	E	Q	E	P	L	M	T	L
Template Known Secondary structure		.	.	.	.						S							.	T	T								S		S			S			.	.	.	.	.	.	.	.										G	G	G	G	G	G		.	.	.	.	.	.	.		S	T	T			T	T	T
Template Predicted Secondary structure		.	.	.	.													.																		.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
						158	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	G	L	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S	V	V	P	E	L	D	M	Y	D
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	Q	G	E	L	M	A	F	E	H	.	.	.	.	.	.	.	.	.	.	.	P	G	F	W	Q	P	M	D	T	L	R	D	K	V	Y	L	E	G	L	W	E	K	G	K	A	P	W	K	T	W	E
Template Known Secondary structure				T	T								.	.	.	.	.	.	.	.	.	.	.		S							S													T	T			T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.												.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions