Job Description P0A6V1 Confidence 100.00% Date Thu Jan 5 11:03:59 GMT 2012 Rank 11 Aligned Residues 238 % Identity 22% Template d1lvwa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E
Query Conservation
Alig confidence				.	.																														.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																														.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	.	.	G	I	V	L	A	G	G	S	G	T	R	L	Y	P	I	T	R	A	V	S	K	Q	L	L	P	I	Y	D	K	.	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	R	D	L	P	L	Y	R	D	L	L	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.										S	T	T	T	T	T	T	T	S	S		G	G	G	S			T	T		.		T	T										T	T										T	T	T									T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.																														.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A
Query Conservation
Alig confidence																																			.	.																																							.	.
Template Conservation																																			.	.																																							.	.
Template Sequence		D	G	S	Q	F	G	V	R	F	S	Y	R	V	Q	E	E	P	R	G	I	A	D	A	F	I	V	G	K	D	F	I	G	D	.	.	S	K	V	A	L	V	L	G	D	N	V	F	Y	G	H	R	F	S	E	I	L	R	R	A	A	S	L	E	D	G	A	V	I	F	G	Y	Y	V	.	.	R	D	P	R	P
Template Known Secondary structure		T	S	G	G	G	T	S								S	S				G	G	G					T					T	T	.	.	S							T	T						T	T										T			S	S									.	.	S			T	T
Template Predicted Secondary structure																																			.	.																																							.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L	A	Y	A	H
Query Conservation
Alig confidence																									.	.	.	.	.	.	.																	.												.
Template Conservation																									.	.	.	.	.	.	.																	.												.
Template Sequence		F	G	V	V	E	F	D	S	E	G	R	V	I	S	I	E	E	K	P	S	R	P	K	.	.	.	.	.	.	.	S	N	Y	V	V	P	G	L	Y	F	Y	D	N	Q	V	V	.	E	I	A	R	R	I	E	P	S	D	R	.	G	E	L	E	I	T	S	V	N	E	E	Y	L	R	M	G	K	L	R	V	E
Template Known Secondary structure		S							T	T	S	B							S		S	S		S	.	.	.	.	.	.	.		S					S						T	T			.										T	T	.	S														T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.																	.												.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		L	M	G	R	.	.	.	.	.	.	.	.	.	G	M	A	W	L	D	T	G	T	H	D	G	L	L	E	A	S	S	F	I	E
Template Known Secondary structure					T	.	.	.	.	.	.	.	.	.	T							S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions