Job Description P0A6V1 Confidence 99.87% Date Thu Jan 5 11:03:59 GMT 2012 Rank 36 Aligned Residues 231 % Identity 17% Template d1h7ea_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.83

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E	F
Query Conservation
Alig confidence																		.	.	.	.	.	.											.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.											.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	V	I	V	I	P	A	R	Y	G	S	S	R	L	P	.	.	.	.	.	.	G	K	P	L	L	D	I	V	G	K	.	P	M	I	Q	H	V	Y	E	R	A	L	Q	V	A	G	V	A	E	V	W	V	A	T	D	D	P	R	V	E	Q	A	V	Q	A	F	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S			S	S	S	T	.	.	.	.	.	.	T	G	G	G				T	T		.												T		T	T									S											T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.											.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																															.	.																																.	.
Query SS confidence																																															.	.																																.	.
Query Sequence		V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	.	.	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	.	.
Query Conservation																																															.	.																																.	.
Alig confidence		.	.	.	.	.																											.	.	.												.	.																																.	.
Template Conservation		.	.	.	.	.																											.	.	.
Template Sequence		.	.	.	.	.	G	G	K	A	I	M	T	R	N	D	H	E	S	G	T	D	R	L	V	E	V	M	H	K	V	E	.	.	.	A	D	I	Y	I	N	L	Q	G	D	E	P	M	I	R	P	R	D	V	E	T	L	L	Q	G	M	R	D	D	P	A	L	P	V	A	T	L	C	H	A	I	S	A	A	E	A
Template Known Secondary structure		.	.	.	.	.	T								S			S	S												S		.	.	.		S							T	T		T	T																	T	T
Template Predicted Secondary structure		.	.	.	.	.																											.	.	.
Template SS confidence
							63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
			175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L
Query Conservation		.
Alig confidence		.																								.																																											.	.
Template Conservation																										.																																											.	.
Template Sequence		A	E	P	S	T	V	K	V	V	V	N	T	R	Q	D	A	L	Y	F	S	R	S	P	I	.	P	Y	P	R	N	A	E	K	A	R	Y	L	K	H	V	G	I	Y	A	Y	R	R	D	V	L	Q	N	Y	S	Q	L	P	E	S	M	P	E	Q	A	E	S	L	.	.	E	Q	L	R	L	M	N	A	G	I	N
Template Known Secondary structure		T		T	T	S							T	T		B						S	S		S	.	S			T	T	G	G	G																				G	G	G	S										T		.	.	T	T						T	T
Template Predicted Secondary structure																										.																																											.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	T	F	E	V	.	.	.	.	.	.	.	.	.	.	.	A	A	T	G	P	G	V	D	T	P	A	C	L	E	K	V	R	A	L	M
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.							S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.												.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions