Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6V1
Confidence100.00%DateThu Jan 5 11:03:59 GMT 2012
Rank12Aligned Residues238
% Identity23%Templated1fxoa_
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase
Resolution1.66

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70..... ....80.........90.......
Predicted Secondary structure 


























.




Query SS confidence 
























































.





















Query Sequence  KSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQY. QSHTLVQHIQRGWSFFNEEMNE
Query Conservation 
  






 



 


   

 



 

 


   
  
   

  



   .    
   
             
Alig confidence 































.























.















......
Template Conservation    







 



 


   

 



 

.


   
  
   

  
 

        
           ......
Template Sequence  KRKGIILAGGSGTRLHPATLAISKQLLPVYDK. PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWG. . . . . .
Template Known Secondary structure 





TTTTTS
GGGSTT.TTTT


TTTTTSGGGT......
Template Predicted Secondary structure 





















.












......
Template SS confidence 















































































   2.......10.........20.........30... ......40.........50.........60.........70....
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASA
Query Conservation                    


 

      
        


 

 
        
  
    
  
             
Alig confidence  ......


























..





































..




Template Conservation  ......            


 

  
   
  ..    
   
           
          

     ..     
Template Sequence  . . . . . . LDLQYAVQPSPDGLAQAFLIGESFIGN. . DLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHV. . LDPER
Template Known Secondary structure  ......

SS


GGGTTT..STT
TTT

SS
..S
GGG
Template Predicted Secondary structure  ......









..












..




Template SS confidence 















































































   75....80.........90.........100. ........110.........120.........130......... 140....
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  FGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAH
Query Conservation   


  
         

              
   



     
   
               


   
        
Alig confidence 






















.......















.









.





















Template Conservation   
 
  
  
 
    


    .......      


     

.  
       .  
    
              
Template Sequence  YGVVEFDQGGKAISLEEKPLEPK. . . . . . . SNYAVTGLYFYDQQVV. DIARDLKPSP. RGELEITDVNRAYLERGQLSVE
Template Known Secondary structure  S
TTS
S
SS
S.......SS
TT.



T.TSS

TT
Template Predicted Secondary structure 











.......


.




.









Template SS confidence 















































































   145....150.........160....... ..170.........180... ......190... ......200.........210.....
 
   258.260.........270.........280.........290.
Predicted Secondary structure 












Query SS confidence 

































Query Sequence  PFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLA
Query Conservation                
    
 
   
  

   
Alig confidence 



.........




















Template Conservation      .........   
 

 
  
   
     
Template Sequence  IMGR. . . . . . . . . GYAWLDTGTHDSLLEAGQFIA
Template Known Secondary structure 

T.........TS

S
Template Predicted Secondary structure 
.........




Template SS confidence 

































   216... 220.........230.........240
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions