Job Description P0A6V1 Confidence 99.84% Date Thu Jan 5 11:03:59 GMT 2012 Rank 41 Aligned Residues 222 % Identity 14% Template d1eyra_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.20

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E	F
Query Conservation
Alig confidence																		.	.	.	.	.	.											.																																							.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.											.																																							.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	I	A	V	I	L	A	R	Q	N	S	K	G	L	P	.	.	.	.	.	.	L	K	N	L	R	K	X	N	G	I	.	S	L	L	G	H	T	I	N	A	A	I	S	S	K	C	F	D	R	I	I	V	S	T	D	G	G	L	I	A	E	E	A	K	N	F	G	V	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S			S	S	S	T	.	.	.	.	.	.	T	G	G	G				T	T		.														T			S							S											T	T			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.											.																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F
Query Conservation
Alig confidence		.	.	.	.																											.
Template Conservation		.	.	.	.																											.
Template Sequence		.	.	.	.	V	V	L	R	P	A	E	L	A	S	D	T	A	S	S	I	S	G	V	I	H	A	L	E	T	I	.	G	S	N	S	G	T	V	T	L	L	Q	P	T	S	P	L	R	T	G	A	H	I	R	E	A	F	S	L	F	D	E	K	I	K	G	S	V	V	S	A	C	P	X	E	H	H	P	L	K
Template Known Secondary structure		.	.	.	.										S	T	T															.	T			S								T	T		T	T											T	T			T	T	T											S	S		T	T	S
Template Predicted Secondary structure		.	.	.	.																											.
Template SS confidence
						68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L	A	Y	A	H	P
Query Conservation
Alig confidence																.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	L	Q	I	N	N	G	E	Y	A	P	X	R	.	H	L	S	D	L	E	Q	P	R	Q	Q	L	P	Q	A	F	R	P	N	G	A	I	Y	I	N	D	T	A	S	L	I	A	N	N	C	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	S					S	S	.		G	G	G	G	T	S		G	G	G	S																						T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	F	I	A	P	T	K	L	Y	I	X	S	H	Q	D	S	I	D	I	D	T	E	L	D	L	Q	Q	A	E	N	I	L	N	H
Template Known Secondary structure		.			S	S								T	T	T	T					S												T
Template Predicted Secondary structure		.
Template SS confidence
			193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions