Job Description P0A6V1 Confidence 100.00% Date Thu Jan 5 11:03:59 GMT 2012 Rank 25 Aligned Residues 257 % Identity 21% Template c3pnnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83 Resolution 1.90 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																														.																			.
Query SS confidence																																																														.																			.
Query Sequence		P	L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	.	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	.
Query Conservation																																																														.																			.
Alig confidence																						.	.	.												.																										.																			.
Template Conservation																						.	.	.												.
Template Sequence		A	X	K	P	T	L	F	V	L	A	A	G	X	G	S	R	Y	G	S	L	.	.	.	K	Q	L	D	G	I	G	P	G	G	D	.	T	I	X	D	Y	S	V	Y	D	A	I	R	A	G	F	G	R	L	V	F	V	I	R	H	S	F	E	K	E	F	R	E	K	I	L	T	K	Y	E	G	R	I	P	V	E
Template Known Secondary structure												T	T		B		T	T	S	S	B	.	.	.							S	T	T	S		.														T										G	G	G								T					T	T	T	S
Template Predicted Secondary structure																						.	.	.												.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
				95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																																	.	.	.
Query SS confidence		.	.																																																																	.	.	.
Query Sequence		.	.	M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	.	.	.	K	G	A	R	C	T	V	A	C	M	P
Query Conservation		.	.																																																																	.	.	.
Alig confidence		.	.																																			.	.	.	.																											.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		L	V	F	Q	E	L	D	R	L	P	E	G	F	S	C	P	E	G	R	E	K	P	W	G	T	N	H	A	V	L	X	G	R	D	A	I	.	.	.	.	R	E	P	F	A	V	I	N	A	D	D	F	Y	G	R	N	G	F	E	V	L	A	R	K	L	X	T	L	E	G	K	Q	G	E	Y	C	X	V	G	Y
Template Known Secondary structure							T	T				T	T					T	T			S										T	T	T	T	T		.	.	.	.		S							S	S		B															T	T	T	T		S	S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.													.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence												.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		V	P	I	E	E	A	S	A	F	G	.	.	.	.	.	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	.	.	.	.	.	.	.	.	.	.	.	.	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	.	.	.	.
Query Conservation												.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Alig confidence												.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		R	V	G	N	T	L	S	E	S	G	G	V	S	R	G	V	C	Q	V	D	E	K	H	L	L	T	G	V	V	E	R	T	G	I	E	R	T	D	G	T	I	S	F	R	D	E	T	G	K	I	C	T	L	A	E	D	A	P	V	S	X	N	X	W	G	F	T	P	D	Y	F	D	Y	S	E	E	L	F	I	N
Template Known Secondary structure			G	G	G	S		B	T	T	B											T	T	S	B														T	T							T	T	S							T	T												T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
				229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L
Query Conservation		.	.
Alig confidence		.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		F	L	N	A	H	G	Q	E	P	K	S	E	F	F	I	P	F	V	V	N	D	L	I	R	S	G	R	A	S	V	E	V	L	D	T	.	.	.	.	.	.	.	.	.	T	A	R	W	F	G	V	T	Y	S	D	D	R	P	G	V	V	A	K	L
Template Known Secondary structure							T	T		S	S																T	S									.	.	.	.	.	.	.	.	.	S				B			S	S	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions