Job Description P0A6V1 Confidence 99.28% Date Thu Jan 5 11:03:59 GMT 2012 Rank 69 Aligned Residues 142 % Identity 15% Template c3pmoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase; PDBTitle: the structure of lpxd from pseudomonas aeruginosa at 1.3 a resolution Resolution 1.30 Å

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		269	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure															.																																												.	.
Query SS confidence															.																																												.	.
Query Sequence		D	A	E	P	Y	W	R	D	V	G	T	L	E	.	A	Y	W	K	A	N	L	D	L	A	S	V	V	P	E	L	D	M	Y	D	R	N	W	P	I	R	T	Y	N	E	S	L	P	P	A	K	F	V	Q	D	R	S	G	.	.	S	H	G	M	T	L	N	S	L	V	S	G	G	C	V	I	S	G	S	V	V
Query Conservation															.																																												.	.
Alig confidence															.																																												.	.																			.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	F	A	G	T	A	L	V	V	A	N	P	Y	L	A	Y	A	S	L	S	H	L	F	D	R	K	P	K	A	A	A	G	I	H	P	T	A	I	V	A	A	D	A	E	V	D	P	S	A	S	V	G	A	Y	A	V	I	E	S	G	A	R	I	G	A	G	V	S	I	G	A	H	C	V	I	G	A	.	.	.
Template Known Secondary structure		T		S	S						S											G	G	G								S				T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.																					.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		V	Q	S	V	L	F	S	R	V	R	V	N	S	F	C	N	I	D	.	S	A	V	L	L	P	E	V	W	V	G	R	S	C	R	L	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	I	D	R	A	C	V	I	P	E	G	M	V	I	.	.	.	.	.	.	.	.
Query Conservation																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence		.																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	R	S	V	I	G	E	G	G	W	L	A	P	R	V	T	L	Y	H	D	V	T	I	G	A	R	V	S	I	Q	S	G	A	V	I	G	G	E	G	F	G	F	A	N	E	K	G	V	W	Q	K	I	A	Q	I	G	G	V	T	I	G	D	D	V	E	I	G	A	N	T	T	I	D	R	G	A	L	S	D	T
Template Known Secondary structure		.	T					T	T					T	T					T	T					T	T					T	T														T	T															S	S					T	T							S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
																397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	N	A	E	E	D	A	R	R	F	Y	R	S	E	E	G	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	G	N	G	V	K	L	D	N	Q	I	M	I	A	H	N	V	Q	I	G	D	H	T	A	M	A	A	C	V	G	I
Template Known Secondary structure					T	T					T	T					T	T					T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions