Job Description P0A6V1 Confidence 99.64% Date Thu Jan 5 11:03:59 GMT 2012 Rank 54 Aligned Residues 197 % Identity 15% Template c3okrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd) Resolution 2.40 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	.	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E	F	V	D	L	L	P	A	Q	Q
Query Conservation																																								.
Alig confidence										.	.	.													.															.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.													.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	V	V	A	I	V	P	.	.	.	A	A	P	K	A	F	Y	Q	L	D	G	Q	.	T	L	I	E	R	A	V	D	G	L	L	D	S	G	V	V	D	T	V	V	V	A	V	P	A	D	R	T	D	E	A	R	Q	I	L	G	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	.	.				G	G	G				T	T		.													T	S											G	G	G									G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.													.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	.	.	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F	G	V	M	A	V	D
Query Conservation																																						.	.
Alig confidence		.																								.	.											.	.																										.	.	.	.	.	.	.
Template Conservation		.																								.	.																																						.	.	.	.	.	.	.
Template Sequence		.	A	M	I	V	A	G	G	S	N	R	T	D	T	V	N	L	A	L	T	V	L	S	E	.	.	P	E	F	V	L	V	H	D	A	A	R	A	L	T	P	P	A	L	V	A	R	V	V	E	A	L	R	D	G	Y	A	A	V	V	P	V	L	.	.	.	.	.	.	.	P	L	S	D	T	I	K	A	V	D
Template Known Secondary structure		.								S	S											T	T			.	.		S							T	T		T	T															T	T		S							.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure		.																								.	.																																						.	.	.	.	.	.	.
Template SS confidence
			74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.								.	.	.	.	.	.	140	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L	.	A	Y	A	H	P	F	P	L	S	C
Query Conservation																																																																							.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.													.							.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		A	N	G	V	V	L	G	T	P	E	R	A	G	L	R	A	V	Q	.	.	.	.	.	.	.	.	.	.	.	T	P	Q	G	F	T	T	D	L	L	L	R	S	Y	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	T	D	D	A	S	L	V	E	H	I	G	G	Q	V	Q	V	V	D	G	.	.	.	.
Template Known Secondary structure		T	T	S							T	T	S							.	.	.	.	.	.	.	.	.	.	.	S													T			.	.	.	.	.	.	.	.	.	.	.	.										T	T									.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.												.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180													.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	P	L	A	F	K	I	T	T	K	L	D	L	L	L	A	Q	A	I	V
Template Known Secondary structure		.	.	.	.	.	.	.		G	G	G					S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions