Job Description P0A6V1 Confidence 98.79% Date Thu Jan 5 11:03:59 GMT 2012 Rank 101 Aligned Residues 206 % Identity 14% Template c3ogzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-sugar pyrophosphorylase; PDBTitle: protein structure of usp from l. major in apo-form Resolution 2.03 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																.	.	.																	.	.	.
Query SS confidence																																.	.	.																	.	.	.
Query Sequence		K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	.	.	.	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	.	.	.	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N
Query Conservation																																.	.	.																	.	.	.
Alig confidence																		.	.	.												.	.	.			.														.	.	.																							.
Template Conservation																		.	.	.																	.																																							.
Template Sequence		K	T	V	F	V	L	V	A	G	G	L	G	E	R	L	G	.	.	.	Y	S	S	I	K	V	S	L	P	V	E	T	A	T	N	T	.	T	Y	L	A	Y	Y	L	R	W	A	Q	R	V	G	G	K	E	V	P	F	V	I	M	T	S	D	D	T	H	D	R	T	L	Q	L	L	R	E	.	L	Q	L	E	V
Template Known Secondary structure		G												G	G	G	T	.	.	.					G	G	G	S	B	S		T	T	T			.	B															T	T									T	T	T											.	T	T
Template Predicted Secondary structure																		.	.	.																	.																																							.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																				.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																				.
Query Sequence		E	E	M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	.	.	.	.	.	.	.	.	.	.	.	G	T	A	D	A	V	T	Q	N	.	.	.	.	.	.	.	.	.	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	.	I	Y	K	Q	D	Y	S	R
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																				.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		P	N	L	H	V	L	K	Q	G	Q	V	F	C	F	A	D	S	A	A	H	L	A	L	D	E	T	G	K	L	L	R	K	P	H	G	H	G	D	V	H	S	L	I	Y	N	A	T	V	A	Q	P	L	V	N	D	W	L	A	A	G	Y	E	S	I	V	F	I	Q	D	T	N	A	G	A	T	I	T	I	P	I
Template Known Secondary structure		T	T												B	S	S	T	T			B		B		T	T	S	S	B							T	T										B				B								T	T									T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.																			.
Query SS confidence																																											.	.																			.
Query Sequence		M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	.	.	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	.	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E
Query Conservation																																											.	.																			.
Alig confidence																																											.	.																			.
Template Conservation
Template Sequence		S	L	A	L	S	A	E	H	S	L	D	M	N	F	T	C	I	P	R	V	P	K	E	P	I	G	L	L	C	R	T	K	K	N	S	G	D	P	W	L	V	A	N	V	E	Y	N	V	F	A	E	V	S	R	A	L	G	F	S	P	F	P	G	S	V	N	T	L	V	F	K	L	S	S	Y	V	D	R	L	R
Template Known Secondary structure									T	T		S										S	S		S	S								S	S	T	T	S																							S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		229
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		375

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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