Job Description P0A6V1 Confidence 99.21% Date Thu Jan 5 11:03:59 GMT 2012 Rank 73 Aligned Residues 206 % Identity 15% Template c3oc9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of putative udp-n-acetylglucosamine2 pyrophosphorylase from entamoeba histolytica Resolution 1.80 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.														.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	.	.	.	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q
Query Conservation																																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.												.	.	.			.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.																	.
Template Sequence		K	T	A	L	I	T	P	A	G	G	Q	G	S	R	L	G	.	.	.	F	E	H	P	K	G	M	F	V	L	P	F	E	I	P	K	.	S	I	F	Q	M	T	S	E	R	L	L	R	L	Q	E	L	A	S	E	Y	S	H	Q	K	N	V	M	I	H	W	F	L	M	T	N	E	E	T	I	E	E	I	N	N
Template Known Secondary structure											S	B		T	T	T	T	.	.	.			S	B	G	G	G					S	S	S			.																								S												T	T	T
Template Predicted Secondary structure																		.	.	.																	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.
Predicted Secondary structure																		.	.	.	.	.	.																.	.	.	.	.	.														.	.	.	.	.																		.
Query SS confidence																		.	.	.	.	.	.																.	.	.	.	.	.														.	.	.	.	.																		.
Query Sequence		H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E	F	.	.	.	.	.	.	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	.	.	.	.	.	.	Y	R	G	T	A	D	A	V	T	Q	N	L	D	.	.	.	.	.	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	.	I
Query Conservation																		.	.	.	.	.	.																.	.	.	.	.	.														.	.	.	.	.																		.
Alig confidence																		.	.	.	.	.	.																.	.	.	.	.	.														.	.	.	.	.																		.
Template Conservation
Template Sequence		Y	F	K	E	H	Q	Y	F	G	L	S	S	E	Q	I	H	C	F	P	Q	G	M	L	P	V	V	D	F	N	G	K	I	L	Y	E	K	K	D	K	P	Y	M	A	P	N	G	H	G	G	L	F	K	A	L	K	D	N	G	I	L	E	F	M	N	E	K	G	I	K	Y	S	V	A	H	N	V	D	N	I	L
Template Known Secondary structure						T	G	G	G	G	S		T	T	S												B		T	T	S		B					T	T									G	G	G								T	T									T									T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	.	.	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		C	K	D	V	D	P	N	M	I	G	Y	M	D	L	L	Q	S	E	I	C	I	K	I	V	K	K	G	F	K	E	E	K	V	G	V	L	V	K	E	Q	E	R	I	K	V	V	E	Y	T	E	L	T	D	E	L	N	K	Q	L	S	N	G	E	F	I	Y	N	C	G	H	I	S	I	N	G	Y	S	T	S	F
Template Known Secondary structure				S	S											T	T		S										S	T	T		S								T	T							G	G	G			T	T	T	T		B		T	T	S		B	S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		223	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	L	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	K	A	A	E
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions