Job Description P0A6V1 Confidence 99.12% Date Thu Jan 5 11:03:59 GMT 2012 Rank 78 Aligned Residues 120 % Identity 9% Template c3i3aC_ PDB info PDB header:transferase Chain: C: PDB Molecule:acyl-[acyl-carrier-protein]--udp-n- PDBTitle: structural basis for the sugar nucleotide and acyl chain2 selectivity of leptospira interrogans lpxa Resolution 2.12 Å

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.															.
Predicted Secondary structure																																												.						.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.						.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	R	N	W	P	I	R	T	Y	N	E	S	L	P	P	A	K	F	V	Q	D	R	S	G	S	H	G	M	T	L	N	S	L	V	S	G	G	C	V	I	S	.	G	S	V	V	V	.	Q	S	V	L	F	S	R	V	R	V	N	S	F	C	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation																																												.						.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.															.						.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		I	H	P	T	A	I	I	D	P	K	A	E	L	H	E	S	V	E	V	G	P	Y	S	I	.	.	.	.	I	E	G	N	V	S	I	Q	E	G	T	I	I	E	G	H	V	K	I	C	A	G	S	E	I	G	K	F	N	R	F	H	Q	G	A	V	I	G	V	M	P	Q	D	L	G	F	N	Q	Q	L	L	T
Template Known Secondary structure				T	T					T	T					T	T					T	T			.	.	.	.			S	S					T	T					T	T					T	T					S	S					T	T								S		T	T			T	T	S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																										.	.	.	.	.	.													.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	V	L	L	P	E	V	W	V	G	R	S	C	R	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	V	I	D	R	.	.	.	.	.	.	.	.	.	.	.	.	A	C	V	I	P	E	G	M	V	I	G	E	N	A	E	E	D	A	R	R
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	V	I	G	D	H	N	I	F	R	E	Y	S	N	I	H	K	G	T	K	E	D	S	P	T	V	I	G	N	K	N	Y	F	M	G	N	S	H	V	G	H	D	C	I	L	G	N	N	N	I	L	T	H	G	A	V	L	A	G	H	V	T	L	G	N	F	A	F	I	S	G	L	V	A	V	H	Q	F	C
Template Known Secondary structure							S	S					T	T							S	B	T	T	B						S	S					T	T					T	T					S	S					T	T					T	T					S	S					T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	R	S	E	E	G	I	V	L	V	T	R	E	M	L	R	K	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	F	V	G	D	Y	S	M	V	A	G	L	A	K	V	V	Q	D
Template Known Secondary structure		.	.				T	T					T	T					S	B
Template Predicted Secondary structure		.	.
Template SS confidence
				159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions