Job Description P0A6V1 Confidence 100.00% Date Thu Jan 5 11:03:59 GMT 2012 Rank 1 Aligned Residues 394 % Identity 56% Template c3brkX_ PDB info PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		R	Q	L	P	L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	.	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N
Query Conservation																																									.
Alig confidence																																							.		.
Template Conservation																																							.
Template Sequence		Q	P	L	A	R	D	A	X	A	Y	V	L	A	G	G	R	G	S	R	L	K	E	L	T	D	R	R	A	K	P	A	V	Y	F	G	G	K	.	A	R	I	I	D	F	A	L	S	N	A	L	N	S	G	I	R	R	I	G	V	A	T	Q	Y	K	A	H	S	L	I	R	H	L	Q	R	G	W	D	F	F	R
Template Known Secondary structure				G	G	G	G												G	G	G	G	G	G	G	S	S	S		G	G	G	S			T	T	T	.			T											T	T										T	T												S
Template Predicted Secondary structure																																							.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I
Query Conservation
Alig confidence										.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		P	E	R	N	E	S	F	D	.	.	.	.	.	.	.	I	L	P	A	S	W	Y	E	G	T	A	D	A	V	Y	Q	N	I	D	I	I	E	P	Y	A	P	E	Y	X	V	I	L	A	G	D	H	I	Y	K	X	D	Y	E	Y	X	L	Q	Q	H	V	D	S	G	A	D	V	T	I	G	C	L	E	V	P	R
Template Known Secondary structure		G	G	G	T					.	.	.	.	.	.	.																T	T										S							S	S					B		T										T	T		S										T
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		X	E	A	T	G	F	G	V	X	H	V	N	E	K	D	E	I	I	D	F	I	E	K	P	A	D	P	P	G	I	P	G	N	E	G	F	A	L	A	S	X	G	I	Y	V	F	H	T	K	F	L	X	E	A	V	R	R	D	A	A	.	.	.	.	.	.	.	.	.	.	D	I	I	P	Y	I	V	E	H	G
Template Known Secondary structure		T	G	G	G	G	S							T	T	S	B							S		S	S				B	T	T	B	T	T																					T	S	S			.	.	.	.	.	.	.	.	.	.			T	T						S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.											.	.	.	.	230	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S	V	V	P	E	L	D	M	Y	D	R	N	W	P	I	R	T	Y	N	E	S	L	P	P	A	K	F	V	Q	D	R	S	G	S	H	G	M	T	L	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	V	A	H	R	F	A	D	S	C	V	R	S	D	F	E	H	E	P	Y	W	R	D	V	G	T	I	D	A	Y	W	Q	A	N	I	D	L	T	D	V	V	P	D	L	D	I	Y	D	K	S	W	P	I	W	T	Y	A	E	I	T	P	P	A	K	F	V	H	D	D	E	D	R	R	G	S	A	V	S	S
Template Known Secondary structure												B				T	T		S	S								S											T	T	S	S	S		S	S		T	T			S	S																	B		S	S		B					S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	G	G	C	V	I	S	G	S	V	V	V	Q	S	V	L	F	S	R	V	R	V	N	S	F	C	N	I	D	S	A	V	L	L	P	E	V	W	V	G	R	S	C	R	L	R	R	C	V	I	D	R	A	C	V	I	P	E	G	M	V	I	G	E	N	A	E	E	D	A	R	R	F	Y	R	S	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	S	G	D	C	I	I	S	G	A	A	L	N	R	S	L	L	F	T	G	V	R	A	N	S	Y	S	R	L	E	N	A	V	V	L	P	S	V	K	I	G	R	H	A	Q	L	S	N	V	V	I	D	H	G	V	V	I	P	E	G	L	I	V	G	E	D	P	E	L	D	A	K	R	F	R	R	T	E	S
Template Known Secondary structure					S	S					S					S					T	T					T	T										T	T					T	T										T	T					T	T				S	S									S				T	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	L	V	T	R	E	M	L	R	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	C	L	I	T	Q	S	X	I	D	K	L
Template Known Secondary structure		S											T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions