Job Description P0A6V1 Confidence 100.00% Date Thu Jan 5 11:03:59 GMT 2012 Rank 23 Aligned Residues 273 % Identity 19% Template c2x5sB_ PDB info PDB header:transferase Chain: B: PDB Molecule:mannose-1-phosphate guanylyltransferase; PDBTitle: crystal structure of t. maritima gdp-mannose2 pyrophosphorylase in apo state. Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																					.														.															.
Query SS confidence																					.														.															.
Query Sequence		L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	.	T	N	K	R	A	K	P	A	V	H	F	G	G	.	K	F	R	I	I	D	F	A	L	S	N	C	I	N	.	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E
Query Conservation																					.														.															.
Alig confidence				.	.																.														.		.													.																											.	.	.	.	.
Template Conservation				.	.																																.																																								.	.	.	.	.
Template Sequence		M	K	.	.	A	L	I	L	A	G	G	S	G	E	R	F	W	P	L	S	T	P	E	T	P	K	Q	F	L	K	L	F	G	N	K	.	S	L	M	R	W	T	F	E	R	V	L	E	E	M	D	P	K	D	V	I	V	V	T	H	K	D	Y	V	E	R	T	K	K	E	L	P	E	L	P	.	.	.	.	.
Template Known Secondary structure				.	.									G	G	G	G	T	T	T		B	T	T	B		G	G	G				B	T	T	B	.											T	T	T			G	G	G																		T	T	S		.	.	.	.	.
Template Predicted Secondary structure				.	.																																.																																								.	.	.	.	.
Template SS confidence
		2	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	.	.	.	.	.	.	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M
Query Conservation																																																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																											.	.														.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	E	N	I	I	A	E	P	M	K	K	N	T	A	P	A	C	F	I	G	T	K	L	A	D	D	.	.	D	E	P	V	L	V	L	P	A	D	H	R	I	P	D	T	K	K	F	W	K	T	V	K	K	A	L	D	A	L	E	K	Y	D	G	L	F	T	F	G	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	G	G	G					S	S													T	T	S		T	.	.	T								S	S		B																							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
												74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.									.
Predicted Secondary structure																				.	.	.	.	.												.																																					.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.												.																																					.	.	.	.	.	.	.	.
Query Sequence		P	V	P	I	E	E	A	S	A	F	G	V	M	A	V	D	E	N	.	.	.	.	.	D	K	I	I	E	F	V	E	K	P	A	.	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	.	.	.	.	.	.	.	.	E
Query Conservation																				.	.	.	.	.												.																																					.	.	.	.	.	.	.	.
Alig confidence				.	.															.	.	.	.	.												.																																					.	.	.	.	.	.	.	.
Template Conservation				.	.
Template Sequence		P	T	.	.	R	P	E	T	G	Y	G	Y	I	E	I	G	E	E	L	E	E	G	V	H	K	V	A	Q	F	R	E	K	P	D	L	E	T	A	K	K	F	V	E	S	G	R	F	L	W	N	S	G	M	F	L	W	K	A	R	E	F	I	E	E	V	K	V	C	E	P	S	I	Y	E	N	L	K	D	V	D
Template Known Secondary structure			S	.	.	S			S	S	S											T	T										S													T																																T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		142	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S	V	V	P	E	L	D	M	Y	D	R	N	W	P	I	R	T	Y	N	E	S	L
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		P	R	N	F	E	E	L	K	K	A	Y	E	K	V	P	S	I	S	V	D	Y	A	.	V	M	E	K	S	K	K	V	R	V	V	K	A	D	F	E	W	S	D	L	G	N	W	S	S	V	R	E	I	E	G	Y	T	E	E	S	D	E	V	I	L	V	D	S	D	R	V	F	V	K	T	H	N	K	P	I
Template Known Secondary structure		S	S												S									.	T	T	T	T		S									S			B				S										S					S	S					S			S						S	S	S
Template Predicted Secondary structure																								.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions