Job Description P0A6V1 Confidence 99.66% Date Thu Jan 5 11:03:59 GMT 2012 Rank 51 Aligned Residues 217 % Identity 15% Template c2vshB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: synthesis of cdp-activated ribitol for teichoic acid2 precursors in streptococcus pneumoniae Resolution 2.00 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																		.									.
Query SS confidence																																																		.									.
Query Sequence		L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	.	I	R	R	M	G	V	I	T	.	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M
Query Conservation																																																		.									.
Alig confidence					.							.	.	.	.	.	.	.	.	.	.	.	.	.											.															.									.
Template Conservation					.							.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		M	I	Y	.	A	G	I	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	Q	F	L	E	L	G	D	R	.	P	I	L	I	H	T	I	E	K	F	V	L	E	P	S	I	E	K	I	V	V	G	V	H	G	D	W	V	S	H	A	E	D	L	V	D	K	Y	L	P	L	Y	K	E	R	I
Template Known Secondary structure					.							.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S			T	T		.												T		T	T										G	G	G													G	G	G	G	G	G
Template Predicted Secondary structure					.							.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		1	.	.		.	.	.	.	.	.														10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	.	.	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E
Query Conservation																																																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	I	I	T	K	G	G	A	D	R	N	T	S	I	K	N	I	I	E	A	I	D	A	Y	R	P	L	T	P	E	D	I	V	V	T	H	D	S	V	R	P	F	I	T	L	R	M	I	Q	D	N	I	Q	L	A	Q	N	H	D	A	V	D	T	V	V	E	A	V	D	T	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.							S	S																S				T	T								T	T		T	T															S	S	S										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		E	S	T	N	G	Q	F	I	T	D	I	P	N	R	A	H	L	Y	Q	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	Q	T	F	R	C	K	D	F	M	D	L	Y	G	S	L	.	.	.	S	D	E	E	K	E	I	L	T	D	A	C	K	I	F	V	I	K	G	K
Template Known Secondary structure		B		S	S	S	S	S		S	B				G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T		.	.	.										S								T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	A	L	.	.	.	.	.	.	.	.	.	.	A	K	G	E	Y	S	N	L	K	I	T	T	V	T	D	L	K	I	A	K	S	M	I
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.					T	T						S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.											210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions