Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6V1
Confidence100.00%DateThu Jan 5 11:03:59 GMT 2012
Rank6Aligned Residues351
% Identity20%Templatec2v0hA_
PDB info PDB header:transferaseChain: A: PDB Molecule:bifunctional protein glmu; PDBTitle: characterization of substrate binding and catalysis of the2 potential antibacterial target n-acetylglucosamine-1-3 phosphate uridyltransferase (glmu)
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80.........90......
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  PLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMN
Query Conservation   

  






 



 


   

 



 

 


   
  
   

  



       
   
            
Alig confidence 


..













...











.


































..........
Template Conservation     ..




 
 
 

 
...  

 



 
 .


 
 
  
   
   
 

       
      ..........
Template Sequence  ALS. . AVILAAGKGTRMYS. . . DLPKVLHTIAGK. PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLAN. . . . . . . . . .
Template Known Secondary structure 
..




GGG
S...SS
GGGSTT.TT
S

TTTTT..........
Template Predicted Secondary structure 
..









...






.








..........
Template SS confidence 















































































   5.. ..10.........20. ........30... ......40.........50.........60........
 
   97..100.........110.........120.........130.........140... ......150.........160.........170....
Predicted Secondary structure 

















..









Query SS confidence 














































. .






























Query Sequence  EFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDH. . IYKQDYSRMLIDHVEKGARCTVACMPVPIEE
Query Conservation                     


 

      
        


 

 ..
        
  
    
  
          
Alig confidence  .......


























..










..
















....









Template Conservation  .......  
         

  

         ..    

   
               
    ....  
       
Template Sequence  . . . . . . . EQVNWVLQTEQLGTAHAVQQAAPFFKD. . NENIVVLYGDAPLITKETLEKLIEAKPENG. . . . IALLTVNLDN
Template Known Secondary structure  .......



S



GGG

T..TSTT
TT



TTS....
SS
Template Predicted Secondary structure  .......










..








....



Template SS confidence 















































































   6970.........80.........90..... ....100.........110.........120..... ....130.....
 
   175....180.........190.........200.........210.........220.........230.........240.........250...
Predicted Secondary structure 







































.
Query SS confidence 














































































.
Query Sequence  ASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGL.
Query Conservation      


  
         

              
   



     
   
               


   
    .
Alig confidence 




























....













































.
Template Conservation                               ....       

      
                   
           
Template Sequence  PTGYGRIIRENGNVVAIVEQKDANAEQLN. . . . IKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQ
Template Known Secondary structure 
TTS
TT
TTT

T....

TT



STT



GGGTT

Template Predicted Secondary structure 

















....


















Template SS confidence 















































































   136...140.........150.........160.... .....170.........180.........190.........200.........210.
 
   254.....260.........270.........280.........290.. .......300.........310.........320..
Predicted Secondary structure 













....

















.......
Query SS confidence 






































. . . .





























. . . . . . .
Query Sequence  AYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLAS. . . . VVPELDMYDRNWPIRTYNESLPPAKFVQDR. . . . . . .
Query Conservation                    
    
 
   
  

   
 ....             
                .......
Alig confidence 






































....





























.......
Template Conservation 
                                                     
 
     
     
     

    
Template Sequence  VVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVK
Template Known Secondary structure 
S
TGGG


SSTT
S
GGG
SS

SS
TT
Template Predicted Secondary structure 












































Template SS confidence 















































































   212.......220.........230.........240.........250.........260.........270.........280.........290.
 
   323......330.........340 .........
Predicted Secondary structure  ....................................................









.

Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

















.








Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SGSHGMTLNSLVSGGCVI. SGSVVVQSV
Query Conservation  ....................................................         
 

    
.  
 
  

Alig confidence  ....................................................

















.








Template Conservation 
     
                                             

         
     
     
  

Template Sequence  IGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVNHLTYVGDSE
Template Known Secondary structure 
TT

TT

SS

TT

SS
TT

TT
S

TT
S
Template Predicted Secondary structure 























































Template SS confidence 















































































   292.......300.........310.........320.........330.........340.........350.........360.........370.
 
   350.........360.... .....370......... 380.........390.........400
Predicted Secondary structure 







........







.











Query SS confidence 














. . . . . . . .














.




















Query Sequence  LFSRVRVNSFCNIDS. . . . . . . . AVLLPEVWVGRSCRL. RRCVIDRACVIPEGMVIGENA
Query Conservation 

    

    
 
........


 
   

    
.   


    

 
  

   
Alig confidence 














........














.




















Template Conservation 

 

 

    
 
          


   

    
  
  

    

 
  
   
Template Sequence  IGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTITRDV
Template Known Secondary structure 
TT

TT

SSSS



SS

TT
S
TT

TT

S
B
Template Predicted Secondary structure 






































Template SS confidence 



























































   372.......380.........390.........400.........410.........420.........430.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions