Job Description P0A6V1 Confidence 100.00% Date Thu Jan 5 11:03:59 GMT 2012 Rank 4 Aligned Residues 360 % Identity 19% Template c2qkxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:bifunctional protein glmu; PDBTitle: n-acetyl glucosamine 1-phosphate uridyltransferase from mycobacterium2 tuberculosis complex with n-acetyl glucosamine 1-phosphate Resolution 2.75 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	P	L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E
Query Conservation
Alig confidence																									.	.	.											.																																									.	.	.
Template Conservation																									.	.	.											.																																									.	.	.
Template Sequence		T	F	P	G	D	T	A	V	L	V	L	A	A	G	P	G	T	R	M	R	S	D	T	.	.	.	P	K	V	L	H	T	L	A	G	R	.	S	M	L	S	H	V	L	H	A	I	A	K	L	A	P	Q	R	L	I	V	V	L	G	H	D	H	Q	R	I	A	P	L	V	G	E	L	A	D	T	L	.	.	.
Template Known Secondary structure					S	S												G	G	G		S	S	S	.	.	.		G	G	G				T	T		.																S								T	T															T	.	.	.
Template Predicted Secondary structure																									.	.	.											.																																									.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	.	.	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I
Query Conservation																																																			.	.
Alig confidence		.	.	.	.	.	.	.	.																																										.	.																												.	.
Template Conservation		.	.	.	.	.	.	.	.																																																																							.	.
Template Sequence		.	.	.	.	.	.	.	.	G	R	T	I	D	V	A	L	Q	D	R	P	L	G	T	G	H	A	V	L	C	G	L	S	A	L	P	D	D	Y	A	G	N	V	V	V	T	S	G	D	T	P	L	L	D	A	D	T	L	A	D	L	I	A	T	H	R	A	V	S	A	A	V	T	V	L	T	T	T	L	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	S									S													T	T	S		T	T			S							S	S		T	T																T	T		S									.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																							.	.
Template SS confidence
										75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		D	D	P	F	G	Y	G	R	I	L	R	T	Q	D	H	E	V	M	A	I	V	E	Q	T	D	A	T	P	S	.	.	.	Q	R	E	I	R	E	V	N	A	G	V	Y	A	F	D	I	A	A	L	R	S	A	L	S	R	L	S	S	N	N	A	Q	Q	E	L	Y	L	T	D	V	I	A	I	L	R	S	D	G
Template Known Secondary structure		S			T	T	S							T	T	S								T	T	T			T	T	.	.	.	T	T	S																						T					S	S	S	S	S			S	T	T									T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		253		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	.	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	E	L	D	M	Y	D	R	N	W	P	I	R	T	Y	N
Query Conservation			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.							.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	V	H	A	S	H	V	.	.	.	.	.	.	.	.	.	.	.	D	D	S	A	L	V	A	G	V	N	N	R	V	Q	L	A	E	L	A	S	E	L	N	R	R	V	V	A	A	H	Q	L	A	G	V	T	V	V	D	P	A	T	T	W	I	D	V	D	V	T	I	G	R	D	T	V	I	H	P	G	T
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	S		G	G	G	G					S																						T	T				S		G	G	G					T	T					T	T					S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.												230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																							.
Query SS confidence																	.																																							.
Query Sequence		E	S	L	P	P	A	K	F	V	Q	D	R	S	G	S	.	H	G	M	T	L	N	S	L	V	S	G	G	C	V	I	S	G	S	V	V	V	Q	S	V	L	F	S	R	V	R	V	N	S	F	C	N	I	D	.	S	A	V	L	L	P	E	V	W	V	G	R	S	C	R	L	R	R	C	V	I	D	R	A	C
Query Conservation																	.																																							.
Alig confidence																	.																																							.
Template Conservation
Template Sequence		Q	L	L	G	R	T	Q	I	G	G	R	C	V	V	G	P	D	T	T	L	T	D	V	A	V	G	D	G	A	S	V	V	R	T	H	G	S	S	S	S	I	G	D	G	A	A	V	G	P	F	T	Y	L	R	P	G	T	A	L	G	A	D	G	K	L	G	A	F	V	E	V	K	N	S	T	I	G	T	G	T
Template Known Secondary structure					T	T					S	S					S	S										T	T					S										T	T					S	S					T	T					T	T											S					T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	P	E	G	M	V	I	G	E	N	A	E	E	D	A	R	R
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		K	V	P	H	L	T	Y	V	G	.	D	A	D	I	G	E	Y	S
Template Known Secondary structure											.	S					T	T
Template Predicted Secondary structure											.
Template SS confidence
		371	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions