Job Description P0A6V1 Confidence 99.48% Date Thu Jan 5 11:03:59 GMT 2012 Rank 62 Aligned Residues 331 % Identity 14% Template c2q4jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:probable utp-glucose-1-phosphate uridylyltransferase 2; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at3g03250, a putative udp-glucose3 pyrophosphorylase Resolution 1.86 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence		K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	.	.	.	.	.	.	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N
Query Conservation																																																.	.	.	.	.	.
Alig confidence																		.	.	.																												.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		K	L	V	V	L	K	L	N	G	G	L	G	T	T	M	G	.	.	.	C	T	G	P	K	S	V	I	E	V	R	D	G	L	T	F	L	D	L	I	V	I	Q	I	E	N	L	N	N	K	Y	G	C	K	V	P	L	V	L	M	N	S	F	N	T	H	D	D	T	H	K	I	V	E	K	Y	T	N	S	N	V
Template Known Secondary structure		T										B	T	T	T	T	T	.	.	.			S	B	S	S	S	S				T	T																			T											T	T	T	T	T	T	T					G	G	G	T	T	S	S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		93	.													.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query Sequence		E	E	.	.	.	.	.	.	.	.	.	.	.	.	M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	.	.	.	.	.	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Conservation
Template Sequence		D	I	H	T	F	N	Q	S	K	Y	P	R	V	V	A	D	E	F	V	P	W	P	S	K	G	K	T	D	K	E	G	W	Y	P	P	G	H	G	D	V	F	P	A	L	M	N	S	G	K	L	D	T	F	L	S	Q	G	K	E	Y	V	F	V	A	N	S	D	N	L	G	A	I	V	D	L	T	I	L	K	H
Template Known Secondary structure															B	T	T	T	T	B		G	G	G	G	T			S	T	T	S						G	G	G									T								T	T									T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																					.																									.	.	.	.
Query SS confidence																																																					.																									.	.	.	.
Query Sequence		H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	.	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L	L	E	E	D	.	.	.	.
Query Conservation																																																					.																									.	.	.	.
Alig confidence																																																					.																									.	.	.	.
Template Conservation
Template Sequence		L	I	Q	N	K	N	E	Y	C	M	E	V	T	P	K	T	L	A	D	V	K	G	G	T	L	I	S	Y	E	G	K	V	Q	L	L	E	I	A	Q	V	P	D	E	H	V	N	E	F	K	S	I	E	K	F	K	I	F	N	T	N	N	L	W	V	N	L	K	A	I	K	K	L	V	E	A	D	A	L	K	M
Template Known Secondary structure								S										G	G	G	T	T	S							T	T							G	G	G	S		G	G	G					T		T	T	T	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
																231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S	V	V	P	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	I	P	N	P	K	E	V	D	G	V	K	V	L	Q	L	E	T	A	A	G	A	A	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	D	N	A	I	G	V	N	V	P	R	S	R	F	L	P	V	K	A	S	S	D	L	L	L	V	Q	S	D	L	Y	T	L	V	D	G
Template Known Secondary structure											T	T										G	G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G		S	S								G	G	G			B			S								S	S	S	S					T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.																		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.															.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	M	Y	D	R	N	W	P	I	R	T	Y	N	E	S	L	P	P	A	K	F	V	Q	D	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	H	G	M	T	L	N	S	L	V	S	G	G	C	V	I	S	G	S	V	V	V	Q	S	V	L	F	S	R	V	R	V	N	S	F	C	N	I
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	T	R	N	K	A	R	T	N	P	S	N	P	S	I	E	L	G	P	E	F	K	K	V	A	T	F	L	S	R	F	K	S	I	P	S	I	V	E	L	D	S	L	K	V	S	G	D	V	W	F	G	S	S	I	V	L	K	G	K	V	T	V	A	A	K	S	G	V	K	L	E	I	P	D	R	A	V	V
Template Known Secondary structure							S	S			S	S	S								G	G	G		S							T	B	S	S			B		T	T								S	S					S	S													T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	A	V	L	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	K	N	I	N	G
Template Known Secondary structure			S					S
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions