Job Description P0A6V1 Confidence 99.26% Date Thu Jan 5 11:03:59 GMT 2012 Rank 71 Aligned Residues 335 % Identity 14% Template c2oefA_ PDB info PDB header:transferase Chain: A: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase 2, PDBTitle: open and closed structures of the udp-glucose2 pyrophosphorylase from leishmania major Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																															.	.	.	.			.	.
Query SS confidence																																															.	.	.	.			.	.
Query Sequence		K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	.	.	.	.	S	G	.	.	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N
Query Conservation																																															.	.	.	.			.	.
Alig confidence																		.	.	.																											.	.	.	.			.	.
Template Conservation																		.	.	.
Template Sequence		S	T	V	V	L	K	L	N	G	G	L	G	T	G	X	G	.	.	.	L	C	D	A	K	T	L	L	E	V	K	D	G	K	T	F	L	D	F	T	A	L	Q	V	Q	Y	L	R	Q	H	C	S	E	H	L	R	F	X	L	X	D	S	F	N	T	S	A	S	T	K	S	F	L	K	A	R	Y	P	W	L	Y
Template Known Secondary structure		T										B	S	G	G	G	T	.	.	.			S	B	G	G	G	S				T	T																		T		T	T									T	T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		E	E	M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	A	D	A	V	T	Q	N	.	.	.	.	.	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		Q	V	F	D	S	E	V	E	L	X	Q	N	Q	V	P	K	I	L	Q	D	T	L	E	P	A	A	W	A	E	N	P	A	Y	E	W	A	P	P	G	H	G	D	I	Y	T	A	L	Y	G	S	G	K	L	Q	E	L	V	E	Q	G	Y	R	Y	X	F	V	S	N	G	D	N	L	G	A	T	I	D	K	R	V
Template Known Secondary structure		T	T					T												T	T	T		S	B				T	T		G	G	G	G						T	T									T	S								T	T									T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.															.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F	G	V	M	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	.	S	M	G	I	Y	V
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		L	A	Y	X	E	K	E	K	I	D	F	L	X	E	V	C	R	R	T	E	S	D	K	K	G	G	H	L	A	R	Q	T	V	Y	V	K	G	K	D	G	Q	P	D	A	E	K	R	V	L	L	L	R	E	S	A	Q	C	P	K	A	D	X	E	S	F	Q	D	I	N	K	Y	S	F	F	N	T	N	N	L	W
Template Known Secondary structure									T		S										G	G	G	T	T	S														S	S	S													S	T	T	S		T	T	T							T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																						.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	A	D	Y	L	Y	E	L	L	E	E	D	D	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L	A	Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	L	P	V	L	L	E	T	X	Q	E	H	G	G	T	L	P	L	P	V	I	R	N	E	K	T	V	D	S	S	N	S	A	S	P	K	V	Y	Q	L	E	T	A	X	G	A	A	I	A	X	F	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	A	S	A	I	V	V	P	R	S	R	F	A	P
Template Known Secondary structure														T	T	S	S												S	S	T	T		T	T	S										G	G	G	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								G	G	G			B
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.														.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.																	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S	V	V	P	E	L	D	M	Y	D	R	N	W	P	I	R	T	Y	N	E	S	L	P	P	A	K	F	V	Q	D	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	H	G	M	T	L	N	S	L	V	S	G	G	C	V	I
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	T	C	A	D	L	L	A	L	R	S	D	A	Y	V	V	T	D	D	F	R	L	V	L	D	D	R	C	H	G	H	P	P	V	V	D	L	D	S	A	H	Y	K	X	X	N	G	F	E	K	L	V	Q	H	G	V	P	S	L	V	E	C	K	R	V	T	V	K	G	L	V	Q	F	G	A	G	N	V	L
Template Known Secondary structure				S									S	T	T					T	T	S						G	G	G	T	T									T	T	T	S	S	S								T	T	T				B		T	T								S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		S	G	S	V	V	V	Q	S	V	.	L	F	S	R	V	R	V	N	S	F	C	N	I	D	S	A	V	L	L	P
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		T	G	T	V	T	I	E	N	T	D	S	A	S	A	F	V	I	P	D	G	A	K	L	N	D	T	T	A	S	P
Template Known Secondary structure										S	S			S						T	T					S
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions