Job Description P0A6V1 Confidence 99.15% Date Thu Jan 5 11:03:59 GMT 2012 Rank 76 Aligned Residues 141 % Identity 15% Template c2iu9C_ PDB info PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine PDBTitle: chlamydia trachomatis lpxd with 100mm udpglcnac (complex ii) Resolution 3.1 Å

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		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.
Predicted Secondary structure																													.	.																																														.					.
Query SS confidence																													.	.																																														.					.
Query Sequence		A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L	A	S	V	V	P	E	.	.	L	D	M	Y	D	R	N	W	P	I	R	T	Y	N	E	S	L	P	P	A	K	F	V	Q	D	R	S	G	S	H	G	M	T	L	N	S	L	V	S	G	G	C	V	I	S	.	G	S	V	V	.
Query Conservation																													.	.																																														.					.
Alig confidence																													.	.																												.	.	.	.															.					.
Template Conservation																																																										.	.	.	.
Template Sequence		N	K	N	F	L	I	T	S	E	S	P	S	L	V	F	Q	K	C	L	E	L	F	I	T	P	V	D	S	G	F	P	G	I	H	P	T	A	V	I	H	P	T	A	I	I	E	D	H	V	C	I	E	P	Y	A	V	.	.	.	.	V	C	Q	H	A	H	V	G	S	A	C	H	I	G	S	G	S	V	I	G
Template Known Secondary structure		S	S						S	S											T	T	T							S			S	B		T	T					T	T					T	T					T	T			.	.	.	.			T	T					T	T					T	T
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.																																												380	.
Predicted Secondary structure																				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	S	V	L	F	S	R	V	R	V	N	S	F	C	N	I	D	.	S	A	V	L	L	P	E	V	W	V	G	R	S	C	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R
Query Conservation																				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	S	T	V	G	E	H	S	Y	I	H	P	R	V	V	I	R	E	R	V	S	I	G	K	R	V	I	I	Q	P	G	A	V	I	G	S	C	G	F	G	Y	V	T	S	A	F	G	Q	H	K	H	L	K	H	L	G	K	V	I	I	E	D	D	V	E	I	G	A	N	T	T	I	D	R	G	R	F	K	H
Template Known Secondary structure		T	T					T	T					S	S					S	S					T	T					T	T								S						S	S	S															T	T					T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	I	D	R	A	C	V	I	P	E	G	M	V	I	G	E	N	A	E	E	D	A	R	R	F	Y	R	S	E	E	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	V	R	E	G	S	K	I	D	N	L	V	Q	I	A	H	Q	V	E	V	G	Q	H	S	M	I	V	A	Q	A	G	I
Template Known Secondary structure						T	T					T	T					T	T					T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions