Job Description P0A6V1 Confidence 61.99% Date Thu Jan 5 11:03:59 GMT 2012 Rank 121 Aligned Residues 163 % Identity 13% Template c2ffuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2 Resolution 1.64 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																.	.	.	.
Query SS confidence										.																.	.	.	.
Query Sequence		V	H	F	G	G	K	F	R	.	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	.	.	.	.	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D
Query Conservation										.																.	.	.	.
Alig confidence										.																.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	F	H	N	E	A	R	S	A	L	L	R	T	V	V	S	V	L	K	K	S	P	P	H	L	I	K	E	I	I	L	V	D	D	Y	S	N	D	P	E	D	G	A	L	L	G	K	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	R	V	L	R	N	D	R	R	E	G	L	M	R
Template Known Secondary structure					S	S																	S		G	G	G										S		S		T					G	G	G	G	B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F	G	V	M	A	V	D	E	N	D	K	I	I	.	.	.	.	.	.	.	E	F
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence													.	.	.																															.																											.	.	.	.	.	.	.
Template Conservation													.	.	.																															.
Template Sequence		S	R	V	R	G	A	D	A	A	Q	A	.	.	.	K	V	L	T	F	L	D	S	H	C	E	C	N	E	H	W	L	E	P	L	L	E	R	V	A	E	D	R	T	R	.	V	V	S	P	I	I	D	V	I	N	M	D	N	F	Q	Y	V	G	A	S	A	D	L	K	G	G	F	D	W	N	L	V	F	K	W
Template Known Secondary structure												S	.	.	.	S							S	S					T	T													T	T		.											T	T	T								S	S							T	T
Template Predicted Secondary structure													.	.	.																															.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	.	.	.	.	.	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.
Template Conservation
Template Sequence		D	Y	M	T	P	E	Q	R	R	S	R	Q	G	N	P	V	A	P	I	K	T	P	M	I	A	G	G	L	F	V	M	D	K	F	Y	F	E	E	L
Template Known Secondary structure												T	S	S		T	T	S					S	S			S	S	S											T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions