Job Description P0A6V1 Confidence 71.09% Date Thu Jan 5 11:03:59 GMT 2012 Rank 119 Aligned Residues 168 % Identity 13% Template c1xhbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1; PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																.	.	.	.							.
Query SS confidence										.																.	.	.	.							.
Query Sequence		V	H	F	G	G	K	F	R	.	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	.	.	.	.	R	M	G	V	I	T	.	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E	F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A
Query Conservation										.																.	.	.	.							.
Alig confidence										.																.	.	.	.							.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	F	H	N	E	A	W	S	T	L	L	R	T	V	H	S	V	I	N	R	S	P	R	H	M	I	E	E	I	V	L	V	D	D	A	S	E	R	D	F	L	K	R	P	L	E	S	.	.	.	.	.	.	.	.	.	.	.	Y	V	K	K	L	K	V	P	V	H	V	I	R	M	E	Q	R	S	G	L	I
Template Known Secondary structure					S	S																S	S		G	G	G										S				G	G	G	T						.	.	.	.	.	.	.	.	.	.	.				S	S	S	S								S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																.																																.	.	.	.	.	.
Query SS confidence																																.																																.	.	.	.	.	.
Query Sequence		D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	.	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A	F	G	.	.	.	.	.	.	V	M	A	V	D	E	N	D	K	I	I	E
Query Conservation																																.																																.	.	.	.	.	.
Alig confidence														.	.	.																.																																.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		R	A	R	L	K	G	A	A	V	S	R	G	.	.	.	Q	V	I	T	F	L	D	A	H	C	E	C	T	A	G	W	L	E	P	L	L	A	R	I	K	H	D	R	R	T	V	V	C	P	I	I	D	V	I	S	D	D	T	F	E	Y	M	A	G	S	D	M	T	Y	G	G	F	N	W	K	L	N	F	R	W
Template Known Secondary structure													S	.	.	.	S							S	S					T	T													T	T												S	S	S								T	T							T	T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	.	.	.	.	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	L	Y	E	L
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		Y	P	V	P	Q	R	E	M	D	R	R	K	G	D	R	T	L	P	V	R	T	P	T	M	A	G	G	L	F	S	I	D	R	D	Y	F	Q	E	I
Template Known Secondary structure												T	T	T		T	T	S					S	B			S	S	S											T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions