Job Description P0A6V1 Confidence 99.96% Date Thu Jan 5 11:03:59 GMT 2012 Rank 29 Aligned Residues 224 % Identity 14% Template c1jylC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ctp:phosphocholine cytidylytransferase; PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc) Resolution 2.40 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	S	V	A	L	I	L	A	G	G	R	G	T	R	L	K	D	L	T	N	K	R	A	K	P	A	V	H	F	G	G	K	F	R	I	I	D	F	A	L	S	N	C	I	N	S	G	I	R	R	M	G	V	I	T	Q	Y	Q	S	H	T	L	V	Q	H	I	Q	R	G	W	S	F	F	N	E	E	M	N	E
Query Conservation
Alig confidence																																			.																																							.	.	.	.	.	.	.	.
Template Conservation																																			.																																							.	.	.	.	.	.	.	.
Template Sequence		I	R	V	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	T	E	N	T	P	K	A	L	V	Q	V	N	Q	K	.	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	K	E	Q	F	D	Y	L	K	E	K	Y	G	V	.	.	.	.	.	.	.	.
Template Known Secondary structure												S			G	G	G	T	T	T	T	S	S	S		G	G	G		B	S	S	S	S	.	B												T	T										T	T	G	G	G	G										.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.																																							.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	D	L	L	P	A	Q	Q	R	M	K	G	E	N	W	Y	R	G	T	A	D	A	V	T	Q	N	L	D	I	I	R	R	Y	K	A	E	Y	V	V	I	L	A	G	D	H	I	Y	K	Q	D	Y	S	R	M	L	I	D	H	V	E	K	G	A	R	C	T	V	A	C	M	P	V	P	I	E	E	A	S	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.																									.	.	.	.	.																	.	.	.																					.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																									.	.	.	.	.																	.	.	.																					.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	L	V	F	N	D	K	Y	A	D	Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	.	.	.	.	.	A	N	S	Y	V	I	D	A	D	N	Y	L	F	K	N	M	.	.	.	F	R	N	D	L	T	R	S	T	Y	F	S	V	Y	R	E	D	C	T	N	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.						T	T	T	T	T	S		T							T	G	G	G		.	.	.	.	.	T	T						S	S				S	S			.	.	.			S				S														.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.	.	.	.	.																	.	.	.																					.	.	.	.	.
Template SS confidence
									75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		F	G	V	M	A	V	D	E	N	D	K	I	I	E	F	V	E	K	P	A	N	P	P	S	M	P	N	D	P	S	K	S	L	A	S	M	G	I	Y	V	F	D	A	D	Y	.	.	.	L	Y	E	L	L	E	E	D	D	R	D	E	N	S	S	H	D	F	G	K	D	L	I	P	K	I	T	E	A	G	L	A
Query Conservation																																															.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.
Template Sequence		E	W	F	L	V	Y	G	D	D	Y	K	V	Q	D	I	I	V	D	S	K	.	.	.	.	.	.	.	.	.	.	A	G	R	I	L	S	G	V	S	F	W	D	A	P	T	A	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D	L	Y	W	D	N	M	V	K	D	N	I	K	E	L	D	V
Template Known Secondary structure									T	T		B										.	.	.	.	.	.	.	.	.	.							S																							S			S	S			T	T					T	S	G	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.											.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	H	P	F	P	L	S	C	V	Q	S	D	P	D	A	E	P	Y	W	R	D	V	G	T	L	E	A	Y	W	K	A	N	L	D	L
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	E	E	L	E	.	.	.	.	.	.	.	.	.	.	G	N	S	I	Y	E	I	D	S	V	Q	D	Y	R	K	L	E	E	I	L
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	S	S						S	S											T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions