 |
Job Description | P75954 | Confidence | 3.24% | Date | Wed Jan 25 15:21:04 GMT 2012 |
Rank | 58 | Aligned Residues | 26 |
% Identity | 23% | Template | c2k75A_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:uncharacterized protein ta0387; |
PDBTitle: solution nmr structure of the ob domain of ta0387 from2 thermoplasma acidophilum. northeast structural genomics3 consortium target tar80b.
|
Resolution | UNK |
|
  |   |
216 | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | C | I | R | L | R | D | D | D | I | K | T | L | F | S | Q | V | T | P | G | T | K | V | N | I | I | N | T | P | I | K |
Query Conservation |   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |
|   | . | . | . | . | . |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |
|   |
Template Sequence |   |
A | R | I | R | I | S | S | F | G | . |
. |
. |
. |
. |
K | Q | L | Q | D | S | D | V | V | R | I | D | N | A | R | V | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | S | . | . | . | . | . | S |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|