Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	H	K	A	I	L	N	S	D	L	I	A	T	K	A	G	D	V	T	V	Y	N	Y	D	G	E	T	R	E	Y	I	S	T	S	N	E	Y	L	A	V	G	V	G	I	P	A	C	S	C	L	D	A	P	G	T	H	K	A	G	Y
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?	?		?																		?		?	?			?	?	?	?	?														?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	I	C	R	S	A	D	F	N	S	W	E	Y	V	P	D	H	R	G	E	T	V	Y	S	T	K	T	G	E	S	K	E	I	K	A	P	G	D	Y	P	E	N	T	T	T	I	A	P	L	S	P	Y	D	K	W	D	G	E	K	W
Secondary structure
SS confidence
Disorder																																																		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		V	T	D	T	E	A	Q	H	S	A	A	V	D	A	A	E	A	Q	R	Q	S	L	I	D	A	A	M	A	S	I	S	L	I	Q	L	K	L	Q	A	G	R	K	L	T	Q	A	E	T	T	R	L	N	A	V	L	D	Y	I	D	A
Secondary structure
SS confidence
Disorder																																		?						?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Sequence		V	T	A	T	D	T	S	T	A	P	D	V	I	W	P	E	L	P	E	A
Secondary structure
SS confidence
Disorder					?		?	?	?								?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2kz6 chain A Region: 126 - 198 Aligned: 63 Modelled: 73 Confidence: 97.7% Identity: 21% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of protein cv0426 from chromobacterium violaceum,2 northeast structural genomics consortium (nesg) target cvt2 Phyre2 PDB 2jxw chain A Region: 19 - 91 Aligned: 53 Modelled: 55 Confidence: 69.3% Identity: 34% PDB header:formin binding protein Chain: A: PDB Molecule:ww domain-binding protein 4; PDBTitle: solution structure of the tandem ww domains of fbp21 Phyre2 PDB 2kt9 chain A Region: 108 - 155 Aligned: 47 Modelled: 48 Confidence: 61.6% Identity: 28% PDB header:ribosomal protein Chain: A: PDB Molecule:probable 30s ribosomal protein psrp-3; PDBTitle: solution nmr structure of probable 30s ribosomal protein2 psrp-3 (ycf65-like protein) from synechocystis sp. (strain3 pcc 6803), northeast structural genomics consortium target4 target sgr46 Phyre2 PDB 1tk7 chain A Region: 19 - 91 Aligned: 55 Modelled: 55 Confidence: 27.5% Identity: 20% PDB header:signaling protein Chain: A: PDB Molecule:cg4244-pb; PDBTitle: nmr structure of ww domains (ww3-4) from suppressor of2 deltex Phyre2 PDB 2c7h chain A Region: 2 - 51 Aligned: 42 Modelled: 50 Confidence: 26.2% Identity: 24% PDB header:ubiquitin-like protein Chain: A: PDB Molecule:retinoblastoma-binding protein 6, isoform 3; PDBTitle: solution nmr structure of the dwnn domain from human rbbp6 Phyre2 PDB 1w18 chain A Region: 39 - 116 Aligned: 71 Modelled: 78 Confidence: 23.9% Identity: 20% PDB header:transferase Chain: A: PDB Molecule:levansucrase; PDBTitle: crystal structure of levansucrase from gluconacetobacter2 diazotrophicus Phyre2 PDB 1o6w chain A domain 1 Region: 69 - 91 Aligned: 23 Modelled: 23 Confidence: 23.1% Identity: 35% Fold: WW domain-like Superfamily: WW domain Family: WW domain Phyre2 PDB 2ov2 chain O Region: 23 - 32 Aligned: 10 Modelled: 10 Confidence: 22.6% Identity: 10% PDB header:protein binding/transferase Chain: O: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: the crystal structure of the human rac3 in complex with the crib2 domain of human p21-activated kinase 4 (pak4) Phyre2 PDB 1rfo chain C Region: 53 - 74 Aligned: 20 Modelled: 20 Confidence: 20.9% Identity: 25% PDB header:viral protein Chain: C: PDB Molecule:whisker antigen control protein; PDBTitle: trimeric foldon of the t4 phagehead fibritin Phyre2 PDB 2odb chain B Region: 23 - 32 Aligned: 10 Modelled: 10 Confidence: 20.5% Identity: 10% PDB header:protein binding Chain: B: PDB Molecule:serine/threonine-protein kinase pak 6; PDBTitle: the crystal structure of human cdc42 in complex with the crib domain2 of human p21-activated kinase 6 (pak6) Phyre2 PDB 1x4t chain A domain 1 Region: 132 - 173 Aligned: 37 Modelled: 42 Confidence: 19.3% Identity: 27% Fold: Long alpha-hairpin Superfamily: ISY1 domain-like Family: ISY1 N-terminal domain-like Phyre2 PDB 2ghs chain A domain 1 Region: 13 - 111 Aligned: 87 Modelled: 87 Confidence: 17.2% Identity: 16% Fold: 6-bladed beta-propeller Superfamily: Calcium-dependent phosphotriesterase Family: SGL-like Phyre2 PDB 2ghs chain A Region: 13 - 111 Aligned: 87 Modelled: 87 Confidence: 17.2% Identity: 16% PDB header:calcium-binding protein Chain: A: PDB Molecule:agr_c_1268p; PDBTitle: crystal structure of a calcium-binding protein, regucalcin2 (agr_c_1268) from agrobacterium tumefaciens str. c58 at 1.55 a3 resolution Phyre2 PDB 2xv5 chain A Region: 128 - 182 Aligned: 48 Modelled: 55 Confidence: 16.1% Identity: 13% PDB header:structural protein Chain: A: PDB Molecule:lamin-a/c; PDBTitle: human lamin a coil 2b fragment Phyre2 PDB 1e0a chain B Region: 23 - 32 Aligned: 10 Modelled: 10 Confidence: 14.7% Identity: 30% PDB header:signalling protein Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha; PDBTitle: cdc42 complexed with the gtpase binding domain of p212 activated kinase Phyre2 PDB 1gk6 chain B Region: 126 - 182 Aligned: 50 Modelled: 57 Confidence: 14.4% Identity: 14% PDB header:vimentin Chain: B: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b) Phyre2 PDB 1zr7 chain A Region: 69 - 91 Aligned: 23 Modelled: 23 Confidence: 14.2% Identity: 39% PDB header:signaling protein Chain: A: PDB Molecule:huntingtin-interacting protein hypa/fbp11; PDBTitle: solution structure of the first ww domain of fbp11 Phyre2 PDB 2dk7 chain A Region: 68 - 91 Aligned: 24 Modelled: 24 Confidence: 14.1% Identity: 21% PDB header:transcription Chain: A: PDB Molecule:transcription elongation regulator 1; PDBTitle: solution structure of ww domain in transcription elongation2 regulator 1 Phyre2 PDB 2h47 chain F Region: 19 - 98 Aligned: 59 Modelled: 70 Confidence: 13.6% Identity: 19% PDB header:oxidoreductase/electron transport Chain: F: PDB Molecule:aromatic amine dehydrogenase; PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1) Phyre2 PDB 1ll7 chain A domain 2 Region: 21 - 32 Aligned: 12 Modelled: 12 Confidence: 13.4% Identity: 50% Fold: FKBP-like Superfamily: Chitinase insertion domain Family: Chitinase insertion domain Phyre2 1 c2kz6A_ 2 c2jxwA_ 3 c2kt9A_ 4 c1tk7A_ 5 c2c7hA_ 6 c1w18A_ 7 d1o6wa1 8 c2ov2O_ 9 c1rfoC_ 10 c2odbB_ 11 d1x4ta1 12 d2ghsa1 13 c2ghsA_ 14 c2xv5A_ 15 c1e0aB_ 16 c1gk6B_ 17 c1zr7A_ 18 c2dk7A_ 19 c2h47F_ 20 d1ll7a2 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2kz6A_ 97.7 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of protein cv0426 from chromobacterium violaceum,2 northeast structural genomics consortium (nesg) target cvt2 2 c2jxwA_ 69.3 34 PDB header:formin binding protein Chain: A: PDB Molecule:ww domain-binding protein 4; PDBTitle: solution structure of the tandem ww domains of fbp21 3 c2kt9A_ 61.6 28 PDB header:ribosomal protein Chain: A: PDB Molecule:probable 30s ribosomal protein psrp-3; PDBTitle: solution nmr structure of probable 30s ribosomal protein2 psrp-3 (ycf65-like protein) from synechocystis sp. (strain3 pcc 6803), northeast structural genomics consortium target4 target sgr46 4 c1tk7A_ 27.5 20 PDB header:signaling protein Chain: A: PDB Molecule:cg4244-pb; PDBTitle: nmr structure of ww domains (ww3-4) from suppressor of2 deltex 5 c2c7hA_ 26.2 24 PDB header:ubiquitin-like protein Chain: A: PDB Molecule:retinoblastoma-binding protein 6, isoform 3; PDBTitle: solution nmr structure of the dwnn domain from human rbbp6 6 c1w18A_ 23.9 20 PDB header:transferase Chain: A: PDB Molecule:levansucrase; PDBTitle: crystal structure of levansucrase from gluconacetobacter2 diazotrophicus 7 d1o6wa1 23.1 35 Fold:WW domain-like Superfamily:WW domain Family:WW domain 8 c2ov2O_ 22.6 10 PDB header:protein binding/transferase Chain: O: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: the crystal structure of the human rac3 in complex with the crib2 domain of human p21-activated kinase 4 (pak4) 9 c1rfoC_ 20.9 25 PDB header:viral protein Chain: C: PDB Molecule:whisker antigen control protein; PDBTitle: trimeric foldon of the t4 phagehead fibritin 10 c2odbB_ 20.5 10 PDB header:protein binding Chain: B: PDB Molecule:serine/threonine-protein kinase pak 6; PDBTitle: the crystal structure of human cdc42 in complex with the crib domain2 of human p21-activated kinase 6 (pak6) 11 d1x4ta1 19.3 27 Fold:Long alpha-hairpin Superfamily:ISY1 domain-like Family:ISY1 N-terminal domain-like 12 d2ghsa1 17.2 16 Fold:6-bladed beta-propeller Superfamily:Calcium-dependent phosphotriesterase Family:SGL-like 13 c2ghsA_ 17.2 16 PDB header:calcium-binding protein Chain: A: PDB Molecule:agr_c_1268p; PDBTitle: crystal structure of a calcium-binding protein, regucalcin2 (agr_c_1268) from agrobacterium tumefaciens str. c58 at 1.55 a3 resolution 14 c2xv5A_ 16.1 13 PDB header:structural protein Chain: A: PDB Molecule:lamin-a/c; PDBTitle: human lamin a coil 2b fragment 15 c1e0aB_ 14.7 30 PDB header:signalling protein Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha; PDBTitle: cdc42 complexed with the gtpase binding domain of p212 activated kinase 16 c1gk6B_ 14.4 14 PDB header:vimentin Chain: B: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b) 17 c1zr7A_ 14.2 39 PDB header:signaling protein Chain: A: PDB Molecule:huntingtin-interacting protein hypa/fbp11; PDBTitle: solution structure of the first ww domain of fbp11 18 c2dk7A_ 14.1 21 PDB header:transcription Chain: A: PDB Molecule:transcription elongation regulator 1; PDBTitle: solution structure of ww domain in transcription elongation2 regulator 1 19 c2h47F_ 13.6 19 PDB header:oxidoreductase/electron transport Chain: F: PDB Molecule:aromatic amine dehydrogenase; PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1) 20 d1ll7a2 13.4 50 Fold:FKBP-like Superfamily:Chitinase insertion domain Family:Chitinase insertion domain 21 c1gq1B_ not modelled 13.0 14 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome cd1 nitrite reductase; PDBTitle: cytochrome cd1 nitrite reductase, y25s mutant, oxidised2 form 22 d1ln1a_ not modelled 12.3 19 Fold:TBP-like Superfamily:Bet v1-like Family:STAR domain 23 d2rm0w1 not modelled 12.3 33 Fold:WW domain-like Superfamily:WW domain Family:WW domain 24 c1f3mB_ not modelled 11.5 30 PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha; PDBTitle: crystal structure of human serine/threonine kinase pak1 25 d1w9pa2 not modelled 11.4 42 Fold:FKBP-like Superfamily:Chitinase insertion domain Family:Chitinase insertion domain 26 c2diiA_ not modelled 11.0 7 PDB header:transcription Chain: A: PDB Molecule:tfiih basal transcription factor complex p62 PDBTitle: solution structure of the bsd domain of human tfiih basal2 transcription factor complex p62 subunit 27 c1v1hB_ not modelled 10.6 25 PDB header:adenovirus Chain: B: PDB Molecule:fibritin, fiber protein; PDBTitle: adenovirus fibre shaft sequence n-terminally fused to the2 bacteriophage t4 fibritin foldon trimerisation motif with3 a short linker 28 d2diia1 not modelled 10.6 7 Fold:BSD domain-like Superfamily:BSD domain-like Family:BSD domain 29 c3o0rC_ not modelled 10.5 16 PDB header:immune system/oxidoreductase Chain: C: PDB Molecule:nitric oxide reductase subunit c; PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment 30 d1jofa_ not modelled 10.3 16 Fold:7-bladed beta-propeller Superfamily:3-carboxy-cis,cis-mucoante lactonizing enzyme Family:3-carboxy-cis,cis-mucoante lactonizing enzyme 31 d2dk1a1 not modelled 9.9 26 Fold:WW domain-like Superfamily:WW domain Family:WW domain 32 c1ox3A_ not modelled 9.9 25 PDB header:chaperone Chain: A: PDB Molecule:fibritin; PDBTitle: crystal structure of mini-fibritin 33 d1q67a_ not modelled 9.6 12 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Dcp1 34 c1x8yA_ not modelled 9.2 12 PDB header:structural protein Chain: A: PDB Molecule:lamin a/c; PDBTitle: human lamin coil 2b 35 d1pcna1 not modelled 9.0 47 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Colipase-like Family:Colipase-like 36 d2e45a1 not modelled 8.7 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 37 c1avyA_ not modelled 8.7 25 PDB header:coiled coil Chain: A: PDB Molecule:fibritin; PDBTitle: fibritin deletion mutant m (bacteriophage t4) 38 d2paja1 not modelled 8.7 12 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:SAH/MTA deaminase-like 39 c2qkmG_ not modelled 8.6 35 PDB header:hydrolase Chain: G: PDB Molecule:spbc3b9.21 protein; PDBTitle: the crystal structure of fission yeast mrna decapping enzyme dcp1-dcp22 complex 40 c2dk1A_ not modelled 8.1 26 PDB header:gene regulation Chain: A: PDB Molecule:ww domain-binding protein 4; PDBTitle: solution structure of ww domain in ww domain binding2 protein 4 (wbp-4) 41 c1gk4A_ not modelled 8.1 10 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2) 42 c1ymzA_ not modelled 7.8 27 PDB header:unknown function Chain: A: PDB Molecule:cc45; PDBTitle: cc45, an artificial ww domain designed using statistical2 coupling analysis 43 c2jz8A_ not modelled 7.8 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bh09830; PDBTitle: solution nmr structure of bh09830 from bartonella henselae2 modeled with one zn+2 bound. northeast structural genomics3 consortium target bnr55 44 d2hqxa1 not modelled 7.7 20 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 45 c2hqxB_ not modelled 7.7 20 PDB header:transcription Chain: B: PDB Molecule:p100 co-activator tudor domain; PDBTitle: crystal structure of human p100 tudor domain conserved2 region 46 d1pina1 not modelled 7.6 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 47 c2b9nZ_ not modelled 7.2 17 PDB header:ribosome Chain: Z: PDB Molecule:50s ribosomal protein ctc; PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf2,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400. 48 c1nwdC_ not modelled 7.0 7 PDB header:binding protein/hydrolase Chain: C: PDB Molecule:glutamate decarboxylase; PDBTitle: solution structure of ca2+/calmodulin bound to the c-2 terminal domain of petunia glutamate decarboxylase 49 c1nwdB_ not modelled 7.0 7 PDB header:binding protein/hydrolase Chain: B: PDB Molecule:glutamate decarboxylase; PDBTitle: solution structure of ca2+/calmodulin bound to the c-2 terminal domain of petunia glutamate decarboxylase 50 c1q67B_ not modelled 6.8 12 PDB header:transcription Chain: B: PDB Molecule:decapping protein involved in mrna degradation- PDBTitle: crystal structure of dcp1p 51 c3movB_ not modelled 6.7 13 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of human lamin-b1 coil 2 segment 52 c2v43A_ not modelled 6.4 24 PDB header:regulator Chain: A: PDB Molecule:sigma-e factor regulatory protein rseb; PDBTitle: crystal structure of rseb: a sensor for periplasmic stress2 response in e. coli 53 c2lawA_ not modelled 6.4 27 PDB header:signaling protein/transcription Chain: A: PDB Molecule:yorkie homolog; PDBTitle: structure of the second ww domain from human yap in complex with a2 human smad1 derived peptide 54 d1f8ab1 not modelled 6.4 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 55 d1o6wa2 not modelled 6.4 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 56 c1o6wA_ not modelled 6.3 35 PDB header:nuclear protein Chain: A: PDB Molecule:pre-mrna processing protein prp40; PDBTitle: solution structure of the prp40 ww domain pair of the yeast2 splicing factor prp40 57 c2ysiA_ not modelled 6.3 30 PDB header:protein binding Chain: A: PDB Molecule:transcription elongation regulator 1; PDBTitle: solution structure of the first ww domain from the mouse2 transcription elongation regulator 1, transcription factor3 ca150 58 c3gf8A_ not modelled 6.2 19 PDB header:carbohydrate binding protein Chain: A: PDB Molecule:putative polysaccharide binding proteins (duf1812); PDBTitle: crystal structure of putative polysaccharide binding proteins2 (duf1812) (np_809975.1) from bacteroides thetaiotaomicron vpi-5482 at3 2.20 a resolution 59 c1yiuA_ not modelled 6.2 23 PDB header:ligase Chain: A: PDB Molecule:itchy e3 ubiquitin protein ligase; PDBTitle: itch e3 ubiquitin ligase ww3 domain 60 d2madh_ not modelled 5.8 10 Fold:7-bladed beta-propeller Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase Family:Methylamine dehydrogenase, H-chain 61 d1eysh1 not modelled 5.7 27 Fold:PRC-barrel domain Superfamily:PRC-barrel domain Family:Photosynthetic reaction centre, H-chain, cytoplasmic domain 62 c2i5nH_ not modelled 5.5 23 PDB header:photosynthesis Chain: H: PDB Molecule:reaction center protein h chain; PDBTitle: 1.96 a x-ray structure of photosynthetic reaction center from2 rhodopseudomonas viridis:crystals grown by microfluidic technique 63 c2kykA_ not modelled 5.4 27 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog; PDBTitle: the sandwich region between two lmp2a py motif regulates the2 interaction between aip4ww2domain and py motif 64 c1eysH_ not modelled 5.4 27 PDB header:electron transport Chain: H: PDB Molecule:photosynthetic reaction center; PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum 65 c2djyA_ not modelled 5.4 14 PDB header:ligase/signaling protein Chain: A: PDB Molecule:smad ubiquitination regulatory factor 2; PDBTitle: solution structure of smurf2 ww3 domain-smad7 py peptide2 complex 66 c2l5fA_ not modelled 5.2 33 PDB header:protein binding Chain: A: PDB Molecule:pre-mrna-processing factor 40 homolog a; PDBTitle: solution structure of the tandem ww domains from hypa/fbp11 67 d1d7qa_ not modelled 5.1 22 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 68 d2oa5a1 not modelled 5.0 21 Fold:BLRF2-like Superfamily:BLRF2-like Family:BLRF2-like 69 d1zr7a1 not modelled 5.0 38 Fold:WW domain-like Superfamily:WW domain Family:WW domain 70 c3ok8A_ not modelled 5.0 0 PDB header:protein binding Chain: A: PDB Molecule:brain-specific angiogenesis inhibitor 1-associated protein PDBTitle: i-bar of pinkbar 71 d1ywia1 not modelled 5.0 35 Fold:WW domain-like Superfamily:WW domain Family:WW domain

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0