Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3gf8A_

Fold library idPDB HeaderMoleculeTitle
c3gf8A_PDB header: carbohydrate binding proteinChain: A: PDB Molecule: putative polysaccharide binding proteinsPDBTitle: crystal structure of putative polysaccharide binding2 proteins (duf1812) (np_809975.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.20 a resolution


Added to library: Sat Aug 28 22:47:43 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ECRLSVKFKYDYNXEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGSALSTGNYLXEVELPVGQYQFXAW
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)





STT
S




TTSBSGGGGSS





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGARDSYDITSLTPGVSTLTDLKLKLKREASLIINKRXETLWYGEVINVNFDGTVHQTETINLIRDTKIV
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) S

TT



TTT
BGGG



TT

S





SSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence RFGFQSYTGSWTLDXNDYDYEIIESNGHLGHDNSLLDDDVLSFRPYYXEQKDPATAYVDXNTXRLXEDRK
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) SSSSS


GGG


TTS
B
S




S
SSTTT
S


TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence TRLVLTEKASGKRVFDINLIDYLAXTNAEGKNLSTQEYLDRQSNYHIIFFLSESWLAVQIVVNGWVHRIQ
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
TTT

TS
GGGS





TTS
TT

 ....
Sequence EENQ
Predicted secondary structure



SS confidence



Known secondary structure (DSSP) GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D