Job Description P0AFM6 Confidence 29.11% Date Thu Jan 5 11:26:46 GMT 2012 Rank 41 Aligned Residues 218 % Identity 12% Template c1yvlB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: structure of unphosphorylated stat1 Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		I	F	S	R	F	A	D	I	V	N	A	N	I	N	A	L	L	E	K	A	E	D	P	Q	K	L	V	R	L	M	I	Q	E	M	E	D	T	L	V	E	V	R	S	T	S	A	R	.	.	.	.	.	.	A	L	A	E	K	K	Q	L	T	R	R	I	E	Q	A	S	A	R	E	V	E	W	Q	E	K	A	E
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	L	E	N	N	F	L	L	Q	H	N	I	R	K	S	K	R	N	L	Q	D	N	F	Q	E	D	P	I	Q	M	S	M	I	I	Y	S	C	L	K	E	E	R	K	I	L	E	N	A	Q	R	F	N	M	L	D	K	Q	K	E	L	D	S	K	V	R	N	V	K	D	K	V	M	C	I	E	H	E	I	K
Template Known Secondary structure						T																				T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		1071	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150
		77	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		L	A	.	.	L	L	K	E	R	E	D	L	A	R	A	A	L	I	E	K	Q	K	L	T	D	L	I	K	S	L	E	H	E	V	T	L	V	D	D	T	L	A	R	M	K	K	E	I	G	E	L	E	N	K	L	S	E	T	R	A	R	Q	Q	A	L	M	L	R	H	Q	A	A	N	S	S	R	D	V	R	R
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		S	L	E	D	L	Q	D	E	Y	D	F	K	C	K	T	L	Q	N	R	E	H	D	Q	K	Q	E	Q	L	L	L	K	K	M	Y	L	M	L	D	N	K	R	K	E	V	V	H	K	I	I	E	L	L	N	V	T	E	L	T	Q	N	A	L	I	N	D	E	L	V	E	W	K	R	R	Q	Q	S	A	C	I	G
Template Known Secondary structure																		T	T					T	T			T	T	T	T	T																																		T															T
Template Predicted Secondary structure
Template SS confidence
		1162	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	S	G	K	L	D	E	A	M	A	R	F	E	S	F	E	R	R	I	D	Q	M	E	A	E	A	E	S	H	S	F	G	K	Q	K	S	L	D	D	Q	F	A	E	L	K	A	D	D	A	I	S	E	Q	L	A	Q	L	K	A	K	M	K	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	P	N	A	C	L	D	Q	L	Q	N	W	F	T	I	V	A	E	S	L	Q	Q	V	R	Q	Q	L	K	K	L	E	E	L	E	Q	K	Y	T	Y	E	H	D	P	I	T	K	N	K	Q	V	L	W	D	R	T	F	S	L	F	Q	Q	L	I	Q	S
Template Known Secondary structure			S					S																																		T	T
Template Predicted Secondary structure
Template SS confidence
		1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions