Job Description P0AFM6 Confidence 8.14% Date Thu Jan 5 11:26:46 GMT 2012 Rank 84 Aligned Residues 53 % Identity 13% Template c1htmB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin ha2 chain; PDBTitle: structure of influenza haemagglutinin at the ph of membrane2 fusion Resolution 2.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	N	A	N	I	N	A	L	L	E	K	A	E	D	P	Q	K	L	V	R	L	M	I	Q	E	M	E	D	T	L	V	E	V	R	S	T	S	A	R	A	L	A	E	K	K	Q	L	T	R	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	N	G	K	L	N	R	V	I	E	K	T	N	E	K	F	H	Q	I	E	K	E	F	S	E	V	E	G	R	I	Q	D	L	E	K	Y	V	E	D	T	K	I	D	L	W	S	Y	N	A	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions