Job Description P0ABF8 Confidence 1.83% Date Thu Jan 5 11:15:25 GMT 2012 Rank 58 Aligned Residues 122 % Identity 11% Template c3giaA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:uncharacterized protein mj0609; PDBTitle: crystal structure of apct transporter Resolution 2.32 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	F	L	A	R	R	W	N	Q	S	T	R	F	G	A	F	L	D	P	V	A	D	K	V	L	V	A	I	A	M	V	L	V	T	E	H	Y	H	S	W	W	V	T	L	P	A	A	T	M	I	A	R	E	I	I	I	S	A	L	R	E	W	M	A	E	L	G	K	R	S	S	V	A	V	S	W	I	G	K
Query Conservation
Alig confidence																	.	.	.	.																							.	.	.
Template Conservation																	.	.	.	.																							.	.	.
Template Sequence		D	G	E	L	P	E	F	F	E	R	K	V	W	F	K	.	.	.	.	S	T	E	G	L	Y	I	T	S	A	L	G	V	L	F	A	L	L	F	N	M	E	.	.	.	G	V	A	S	I	T	S	A	V	F	M	V	I	Y	L	F	V	I	L	S	H	Y	I	L	I	D	E	V	G	G	R	K	E	I	V	I
Template Known Secondary structure			S	S			S	S			T	T	S			S	.	.	.	.		T																	S				.	.	.																								T
Template Predicted Secondary structure																	.	.	.	.																							.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	T	T	A	Q	M	V	A	L	A	W	L	L	W	R	P	N	I	W	V	E	Y	A	G	I	A	L	F	F	V	A	A	V	L	T	L	W	S	M	L	Q	Y	L	S	A	A	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	F	I	V	V	L	G	V	F	L	L	L	L	Y	Y	Q	W	I	T	N	R	F	V	F	Y	G	I	I	A	T	F	I	G	V	L	I	F	E	I	I	Y	R	K	V	T	K	R	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions