Job Description P77306 Confidence 99.83% Date Thu Jan 5 12:27:33 GMT 2012 Rank 2 Aligned Residues 157 % Identity 21% Template c3bk6C_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:ph stomatin; PDBTitle: crystal structure of a core domain of stomatin from2 pyrococcus horikoshii Resolution 3.20 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	H	E	I	I	P	I	N	M	N	T	L	K	L	E	V	S	R	S	T	I	D	S	L	I	T	K	D	R	M	R	V	D	V	V	V	A	F	F	V	R	V	K	P	S	V	E	G	I	A	T	A	A	Q	T	L	G	Q	R	T	L	S	P	E	D	L	R	M	L	V	E	D	K	F	V	D	A	L	R
Query Conservation
Alig confidence																							.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	E	K	A	V	I	V	D	L	R	T	Q	V	L	D	V	P	V	Q	E	.	.	.	T	I	T	K	D	N	V	P	V	R	V	N	A	V	V	Y	F	R	V	V	D	P	V	K	A	V	T	.	.	.	.	.	.	.	.	.	.	.	Q	V	K	N	Y	I	M	A	T	S	Q	I	S	Q	T	T	L	R
Template Known Secondary structure											S	S											.	.	.				T	T																							.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																							.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	A	A	Q	M	T	M	H	E	L	Q	D	T	R	E	N	F	V	Q	G	V	Q	N	T	V	A	E	D	L	S	K	N	G	L	E	L	E	S	V	S	L	T	N	F	N	Q	T	S	K	E	H	F	N	P	N	N	A	F	D	A	E	G	L	T	K	L	T	Q	E	T	E	R	R	R	R	E	R	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	I	G	Q	A	H	L	D	E	L	L	S	E	R	D	K	L	N	M	Q	L	Q	R	I	I	D	E	A	T	D	P	W	G	I	K	V	T	A	V	E	I	K	D	V	E	L	P	A	G	M	Q	K	A	M	A	R	Q	A	E	A	E	R	E	R	R	A	R	I	T	L	A	E	A	E	R	Q	A	A	E
Template Known Secondary structure							S																								T	G	G	G	T															T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		223	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Q	D	V	E	V	A	V	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	R	E	A	A	E	I	I	S	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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