Return to main results Retrieve Phyre Job Id

Job DescriptionP77306
Confidence25.35%DateThu Jan 5 12:27:33 GMT 2012
Rank15Aligned Residues58
% Identity24%Templatec2e0zA_
PDB info PDB header:virus like particleChain: A: PDB Molecule:virus-like particle; PDBTitle: crystal structure of virus-like particle from pyrococcus2 furiosus
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.... .....70.........80... ......90.........100........
Predicted Secondary structure 





..




....












Query SS confidence 













. .


















. . . .
























Query Sequence  KVVMSGGAIVMPIF. . HEIIPINMNTLKLEVSRST. . . . IDSLITKDRMRVDVVVAFFVRVKPS
Query Conservation       
     
  ..                   ....     
 
   
         
   
Alig confidence 













..


















....
























Template Conservation    

 
 

 

 
    




      

 



 



 
       
 
 

   

  
Template Sequence  KEIFRGGIIVTLNIDENKVIIFANTPAVLDVVVGQDVTLQELGPEGDDVAFLVSEAIGIRIKNP
Template Known Secondary structure 
TT
TTS
TT

STTT



SSS
G
Template Predicted Secondary structure 





















Template SS confidence 































































   275....280.........290.........300.........310.........320.........330........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions