Job Description P77306 Confidence 4.79% Date Thu Jan 5 12:27:33 GMT 2012 Rank 86 Aligned Residues 66 % Identity 18% Template c1qleB_ PDB info PDB header:oxidoreductase/immune system Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment Resolution 3.0 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	M	F	T	A	I	I	A	V	C	I	L	F	I	I	G	I	I	F	A	R	L	Y	R	R	A	S	A	E	Q	A	F	V	R	T	G	L	G	G	Q	.	.	.	K	V	V	M	S	G	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	T	L	V	P	V	L	I	L	V	A	I	G	A	F	S	L	P	I	L	F	R	S	Q	E	M	P	N	D	P	D	L	V	I	K	A	I	G	H	Q	W	Y	W	S	Y	E	Y	P	N	D	G	V	A	F	D	A	L	M	L	E	K	E	A	L	A	D	A	G	Y	S	E	D	E	Y	L	L	A	T	D	N
Template Known Secondary structure																										S			S	S		S							B		S	S	S	B					S	S	S						B		B			T	T	T	T	G	G	G	T			G	G	G	S	S	S		B	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
			59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	V	M	P	I	F	H	E	I	I	P	I	N	M	N	T	L	K	L
Query Conservation		.
Alig confidence		.						.
Template Conservation								.
Template Sequence		P	V	V	V	P	V	.	G	K	K	V	L	V	Q	V	T	A	T	D	V
Template Known Secondary structure							T	.	T	S								B	S	S	S
Template Predicted Secondary structure								.
Template SS confidence
		161	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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