Job Description P32715 Confidence 3.48% Date Thu Jan 5 11:50:37 GMT 2012 Rank 93 Aligned Residues 156 % Identity 15% Template c3llqB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:aquaporin z 2; PDBTitle: aquaporin structure from plant pathogen agrobacterium tumerfaciens Resolution 2.01 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	F	T	N	P	D	Y	M	R	Y	A	V	K	T	L	L	A	C	L	I	C	Y	T	F	Y	S	G	V	D	W	E	G	I	H	T	C	M	L	T	C	V	I	V	A	N	P	N	V	G	S	S	Y	Q	K	M	V	L	R	F	G	G	A	F	C	G	A	I	L	A	L	L	F	T	L	L	V	M	P
Query Conservation
Alig confidence																																																	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		A	F	P	E	L	G	I	G	F	T	G	V	A	L	A	F	G	L	T	V	L	T	M	A	Y	A	V	G	G	I	S	G	G	H	F	N	P	A	V	S	V	G	L	T	V	A	G	.	.	.	R	F	P	A	S	S	L	V	P	Y	V	I	A	Q	V	A	G	A	I	V	A	A	A	A	L	Y	V	I	A	T
Template Known Secondary structure		T		T	T	T																															S										T	T	.	.	.	S	S																												T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		422																									.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	N	I	V	E	L	L	F	V	L	A	P	I	F	L	L	G	A	W	I	A	T	S	S	E	R	S	S	Y	I	G	T	Q	M	V	V	T	F	A	L	A	T	L	E	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	A	G	I	D	L	G	G	F	A	S	N	G	Y	G	E	H	S	P	G	G	Y	S	L	V	S	A	L	L	I	E	I	I	L	T	A	F	F	L	I	V	I	L	G	S	T	H	G	R	V	P	A	G	F	A	P	I	A	I	G	L	A	L	T	L	I	H	L	I	S	I	P	V	T	N	T	S	V	N
Template Known Secondary structure		T	S	T	T				T	T	T	T					G	G	G	S	T	T																										T	S	T	T	S		T	T																						S			S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
									468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	N	V	F	G	P	V	Y	D	L	V	E	I	R	D	R	A	L	G	I	I	I	G	T	V	V	S	A	V	I	Y	T	F	V
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	R	S	T	G	Q	A	L	F	V	G	G	W	A	L	Q	Q	L	W	L	F	W	L	A	P	I	V	G	G	A	A	G	A	V	I	W	K	L	F
Template Known Secondary structure														T					S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions