Job Description P32715 Confidence 7.32% Date Thu Jan 5 11:50:37 GMT 2012 Rank 26 Aligned Residues 145 % Identity 19% Template c3gd8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: crystal structure of human aquaporin 4 at 1.8 and its mechanism of2 conductance Resolution 1.80 Å

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		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																												.																																														.	.	.	.	.	.	.	.
Query SS confidence																												.																																														.	.	.	.	.	.	.	.
Query Sequence		V	K	T	L	L	A	C	L	I	C	Y	T	F	Y	S	G	V	D	W	E	G	I	H	T	C	M	.	L	T	C	V	I	V	A	N	P	N	V	G	S	S	Y	Q	K	M	V	L	R	F	G	G	A	F	C	G	A	I	L	A	L	L	F	T	L	L	V	M	P	W	L	D	N	.	.	.	.	.	.	.	.
Query Conservation																												.																																														.	.	.	.	.	.	.	.
Alig confidence																												.													.	.																																.	.	.	.	.	.	.	.
Template Conservation																																									.	.
Template Sequence		I	S	L	C	F	G	L	S	I	A	T	M	V	Q	C	F	G	H	I	S	G	G	H	I	N	P	A	V	T	V	A	M	V	C	T	R	K	I	S	.	.	I	A	K	S	V	F	Y	I	A	A	Q	C	L	G	A	I	I	G	A	G	I	L	Y	L	V	T	P	P	S	V	V	G	G	L	G	V	T	M	V
Template Known Secondary structure																										S										T	T	S	S		.	.																										S						T	T	T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
													426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	I	V	E	L	L	F	V	L	A	P	I	F	L	L	G	A	W	I	A	T	S	S	E	R	S	S	Y	I	G	T	Q	M	V	V	T	F	A	L	A	T	L	E	N	V	F	G	P	V	Y	D	L	V	E	I	R	D	R	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	N	L	T	A	G	H	G	L	L	V	E	L	I	I	T	F	Q	L	V	F	T	I	F	A	S	C	D	S	K	R	T	D	V	T	G	S	I	A	L	A	I	G	F	S	V	A	I	G	H	L	F	A	I	N	Y	T	G	A	S	M	N	P	A	R	S	F	G	P	A	V	I	M	G	N	W	E	N	H
Template Known Secondary structure			T	T	S																								T		T	T		S				S																																						T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
					483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	L	G	I	I	I	G	T	V	V	S	A	V	I	Y	T	F	V	W
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		W	I	Y	W	V	G	P	I	I	G	A	V	L	A	G	G	L	Y	E	Y	V	F
Template Known Secondary structure		T																				T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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