Job Description P32715 Confidence 6.99% Date Thu Jan 5 11:50:37 GMT 2012 Rank 30 Aligned Residues 136 % Identity 13% Template c3dh4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.								.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																															.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.
Query Sequence		L	L	A	C	L	I	C	Y	T	F	Y	S	G	V	D	W	E	G	I	H	T	C	M	L	T	C	V	I	V	.	.	.	.	.	.	.	A	N	P	N	V	G	S	S	Y	Q	K	M	V	L	R	F	G	G	A	F	C	G	A	I	L	A	L	L	F	T	L	L	V	M	P	W	L	D	N	I	V	E	L	L
Query Conservation																															.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.																	.	.
Template Conservation																																																						.	.
Template Sequence		V	K	G	V	V	F	A	A	L	A	A	A	I	V	S	S	L	A	S	M	L	N	S	T	A	T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	.	.	A	A	V	V	A	L	I	I	A	C	L	I	A	P	M	L	G	G	I	G	Q	A	F	Q	Y	I
Template Known Secondary structure																																	T							S		S		S	S									.	.													G	G	G	G	G	G		S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		431	.									.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.
Query Sequence		F	V	.	.	.	.	.	.	.	.	L	A	P	I	F	L	L	G	A	W	I	A	T	S	S	E	R	S	S	Y	I	G	T	Q	M	V	V	T	F	A	L	A	T	L	E	N	V	F	G	P	V	Y	D	L	V	E	I	R	D	R	A	L	G	I	I	I	G	T	V	V	S	A	V
Query Conservation				.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F	W	K	K	T	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S
Template Known Secondary structure						T	T	T															T	T																						T	S	S	S																									T
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions