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Job DescriptionP32715
Confidence16.15%DateThu Jan 5 11:50:37 GMT 2012
Rank6Aligned Residues118
% Identity16%Templatec2ht2B_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex
Resolution3.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380.........390.........400.........410.........420.........430.......
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Query Sequence  LLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIF
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Template Sequence  FVARVITTLLCFSSGAPGGIFAPMLA. . . . . . . . . . . . . . . . . . . LGTVLGTAFGMVAVEL. FPQYHLEAGTFAIAGMGA
Template Known Secondary structure  TT
SSBS...................TT.
GGGT

TTT
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   337..340.........350.........360.. .......370........ .380.........390......
 
   438.440.........450.........460.........470.........480.........490.........500.........510.....
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Query Sequence  LLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEARTLPQKLAG
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Template Sequence  LLAASIRA. . . . . . . . . . . . PLTGIILVLEMTDNYQ. . . . . . . . LILPMIITGLGATLLAQFTGGKPLHSAILARTLA
Template Known Secondary structure  TS

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GG........GTT


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   397..400.... .....410.........420 .........430.........440.........450....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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