Job Description P0AF78 Confidence 14.58% Date Thu Jan 5 11:25:31 GMT 2012 Rank 25 Aligned Residues 146 % Identity 9% Template c3ojaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex Resolution 2.70 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		Q	G	V	R	M	L	E	Q	H	I	R	D	A	K	A	E	L	D	K	A	G	K	S	R	V	D	L	L	A	R	V	K	L	S	H	D	K	L	K	D	L	R	E	R	K	A	S	L	E	A	R	A	L	E	A	L	S	K	N	V	N	P	.	.	S	L	I	N	E	V	A	E	E	I	A	R	L	E	N	L
Query Conservation																																																																.	.
Alig confidence																																																																.	.
Template Conservation
Template Sequence		R	E	I	D	A	L	K	E	Q	Y	R	T	V	I	D	Q	V	T	L	R	K	Q	A	K	I	T	L	E	Q	K	K	K	A	L	D	E	Q	V	S	N	G	R	R	A	H	A	E	L	D	G	T	L	Q	Q	A	V	G	Q	I	E	L	Q	H	A	T	E	E	Q	S	P	L	Q	L	L	R	A	I	V	K	R
Template Known Secondary structure											T																																														T	T	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	A	E	E	Q	V	L	S	N	L	E	V	S	R	D	G	V	E	K	A	V	T	A	T	A	Q	R	I	A	Q	F	E	Q	Q	M	E	V	V	K	A	T	E	A	M	Q	R	A	Q	Q	A	V	T	T	S	T	V	G	A	S	S	S	V	S	T	A	A	E	S	L
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		Y	E	E	M	Y	V	E	Q	Q	S	V	Q	N	N	A	I	R	D	W	D	M	Y	Q	H	K	E	T	Q	L	A	E	E	N	.	.	A	R	L	K	K	L	N	G	E	A	D	L	A	L	A	S	A	N	A	T	L	Q	E	L	V	V	R	E	Q	N	L	A	S	Q	L
Template Known Secondary structure																																			.	.
Template Predicted Secondary structure																																			.	.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.			.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions