Job Description P0AF78 Confidence 14.47% Date Thu Jan 5 11:25:31 GMT 2012 Rank 26 Aligned Residues 61 % Identity 15% Template c3a5tB_ PDB info PDB header:transcription regulator/dna Chain: B: PDB Molecule:transcription factor mafg; PDBTitle: crystal structure of mafg-dna complex Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	S	L	F	T	L	G	K	S	F	I	S	Q	A	E	E	S	I	E	E	T	Q	G	V	R	M	L	E	Q	H	I	R	D	A	K	A	E	L	D	K	A	G	K	S	R	V	D	L	L	A	R	V	K	L	S	H	D	K	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	Q	R	R	R	T	L	K	N	R	G	Y	A	A	S	C	R	V	K	R	V	T	Q	K	E	E	L	E	K	Q	K	A	E	L	Q	Q	E	V	E	K	L	A	S	E	N	A	S	X	K	L	E	L	D	A	L	R	S	K	Y	E
Template Known Secondary structure																																											T	T	T								S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions