Job Description P0AF78 Confidence 8.26% Date Thu Jan 5 11:25:31 GMT 2012 Rank 58 Aligned Residues 59 % Identity 15% Template c1t2kD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2; PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna Resolution 3.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	F	T	L	G	K	S	F	I	S	Q	A	E	E	S	I	E	E	T	Q	G	V	R	M	L	E	Q	H	I	R	D	A	K	A	E	L	D	K	A	G	K	S	R	V	D	L	L	A	R	V	K	L	S	H	D	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	R	K	F	L	E	R	N	R	A	A	A	S	R	S	R	Q	K	R	K	V	W	V	Q	S	L	E	K	K	A	E	D	L	S	S	L	N	G	Q	L	Q	S	E	V	T	L	L	R	N	E	V	A	Q	L	K	Q	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions