Job Description P0AF78 Confidence 7.10% Date Thu Jan 5 11:25:31 GMT 2012 Rank 82 Aligned Residues 54 % Identity 13% Template c1gd2G_ PDB info PDB header:transcription/dna Chain: G: PDB Molecule:transcription factor pap1; PDBTitle: crystal structure of bzip transcription factor pap1 bound2 to dna Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	S	F	I	S	Q	A	E	E	S	I	E	E	T	Q	G	V	R	M	L	E	Q	H	I	R	D	A	K	A	E	L	D	K	A	G	K	S	R	V	D	L	L	A	R	V	K	L	S	H	D	K	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	N	R	A	A	Q	R	A	F	R	K	R	K	E	D	H	L	K	A	L	E	T	Q	V	V	T	L	K	E	L	H	S	S	T	T	L	E	N	D	Q	L	R	Q	K	V	R	Q	L	E	E	E	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions