Job Description P00960 Confidence 96.38% Date Thu Jan 5 10:57:22 GMT 2012 Rank 20 Aligned Residues 121 % Identity 17% Template d1atia2 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.75

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																							.																	.	.	.	.	.
Query SS confidence																							.																	.	.	.	.	.
Query Sequence		P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	.	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	K	P	.	.	.	.	.	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N	W	E	N	P	T	L
Query Conservation																							.																	.	.	.	.	.
Alig confidence																							.																	.	.	.	.	.																							.
Template Conservation																																																																			.
Template Sequence		G	F	G	I	A	Q	I	G	K	A	F	R	N	E	I	T	P	R	N	F	I	F	R	V	R	E	F	E	Q	M	E	I	E	Y	F	V	R	P	G	E	D	E	Y	W	H	R	Y	W	V	E	E	R	L	K	W	W	Q	E	M	G	L	S	R	E	N	.	L	V	P	Y	Q	Q	P	P	E	S	S	A	H	Y
Template Known Secondary structure		S											B			S	S			T	G	G	G	S		S													G	G	G																			T	T			G	G	G	.								T	T	T	S		T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.																																			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure															.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	W	G	L	G	W	E	V	W	L	N	G	.	.	M	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	T	Y	F	Q	Q	V	G	G	L	E	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L
Query Conservation															.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	A	T	V	D	I	L	Y	R	F	P	H	G	S	L	E	L	E	G	I	A	Q	R	T	D	F	D	L	G	S	H	T	K	D	Q	E	A	L	G	I	T	A	R	V	L	R	N	E	H	S	T	Q	R	L	A	Y	R	D	P	E	T	G	K	W	F	V	P	Y	V	I	E	P	S	A	G	V	D	R	G
Template Known Secondary structure			S										T	T												T	T								S	S	T	T	T	T	T			S						S				S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		171	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions